| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4892 |
|---|
| Symbol | |
|---|
| ID | 6180221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 2039568 |
|---|
| End bp | 2040215 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641684645 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001811556 |
|---|
| Protein GI | 172063905 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00111167 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTT CGATCACGCG CCGGCGCCTG CTGGCCGCCG GCATGGCTGC GGCCAGCCTC
CCGCTGTCCG GCTGCTTCAC GCCGAAGCTG TACAAGGAGA GCGCGTACCA CGAACAAGTG
TCCGCGTTCA TGATCACCGA AGACGGCAAG AAACTCGTCG TCCTCGGCCG GGATTACCAT
TACATCTTCG ATCTGCCTGC CTCCCTGCGG CCCGTGCTGC AGTCCGGCTA CCGGAAGTCG
CTGCATACCC AGTTCACCGA CTTTCGTGGG AACGGCAGCG GCGTGACCGG CCACTACCGG
ATTCTGTTGC CGAAGGACGC ATCGGCGGAC GATCAACAGG CCGCGACCGC CGACGGCTTC
ACCGCCGCGC GGGCCGGGCA CGTGCTCGAA GGCGACATCG GCGGCAAGCG CTACTCGACC
GAAGGTTTCG CCGACAAGGC CAAGGACAAG GACAACACCG CACAAGCGTT CAACCGGCCG
TACAACGTGT ACGTCAGGGA ATCGCCGTCC GTGGTCGGCA TGGGCTTGCG GATCCTCGCG
ACGCCGGTCA CGGTCGCCGC CGACGGCGTG CTCGTGCTGG GCGGCATCGT GCTCTTGCCT
ATCGCGGTCA TCGCGATCGA GGCGAACGGC GGCCTGCGGA TCATGTAA
|
|---|
| Protein sequence | MRISITRRRL LAAGMAAASL PLSGCFTPKL YKESAYHEQV SAFMITEDGK KLVVLGRDYH
YIFDLPASLR PVLQSGYRKS LHTQFTDFRG NGSGVTGHYR ILLPKDASAD DQQAATADGF
TAARAGHVLE GDIGGKRYST EGFADKAKDK DNTAQAFNRP YNVYVRESPS VVGMGLRILA
TPVTVAADGV LVLGGIVLLP IAVIAIEANG GLRIM
|
|---|
| |