Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4823 |
Symbol | |
ID | 6180354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1963450 |
End bp | 1964400 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641684578 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001811489 |
Protein GI | 172063838 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAGTGC TGGTGACCGG GGCGGGCGGA TTTGTCGGAA CGGCGTTGGT CGAACGGCTG CTGCATGACG GTATCGCGGA GCCTGGCGAT GTGTCGGAAC TGTTGTTGGT CGACCGGCAA GCGGAGTGGC CGTACGACGA TGCGCGAATC ACGGCACTGG TCGGCGATTT CAGCAGCCCG GAGATTCTTG AGCCGCAGCT GTCGAAACCT GTCGACGTCG TCTTTCATCT GGCGAGCATG CCCGGCTCGC AGGCGGAAGC CGAACCGGCT GAAGGCGACC GGGTAAATCT GTCGGGGATG CTGGCGCTGT TCGAACGCCT GGCGAAGCAA ACGACGGAGC AGGGGCGTGC GGCGCGCGTC GTTTATGCCA GCAGTGTTGC GGCGTTGGGC GAGTCGTTAC CCCCGTCCGT GGACGAGCAC ACCCTGCCGC GCCCGACGAT GAGCTACGGC GTGCACAAGC TGGTTGGCGA GCTGATCCTT GCCGACTGGA CGCGACGCGG CAAGCTGGAT GGCCGTGCGT TACGCCTGCC GGGCATCGTG GCTCGTCCGG TGCTTTCTGC TGGACATGGA TCCGCGTTCA TGAGCCAGAT CTTCCGCGCG GCGCAGAGCG GCCAGTCTTA TACATGTCCT GTTGCGCCTT CGGCCACCGT GTGGTGGATG TCCCGCAGAT GCTGTGTCGA CAACCTGCTG CACGCCGGAC GCATGTCCGC AGAGGGGTTG CACGTTGGCC GAGTCTGGAC GCCCCCAGTG CTGCATCTGT CGGTTCAAGA GATCGTCGAT GCGCTGGTCC GGCGGTTCGG CTCGTTCGAC ATCGACTACG CTCCGGTGGA GCGGATCGAG CGGCTTTTCG GACGACAACC GCCGCTGACC GATCGCCGTG CCATCGAGGC GGGATTTCGG AACGACGGTA CTATCGACGC GCTTGTCACG CATGCGCTCG AGCGCGAGTA A
|
Protein sequence | MRVLVTGAGG FVGTALVERL LHDGIAEPGD VSELLLVDRQ AEWPYDDARI TALVGDFSSP EILEPQLSKP VDVVFHLASM PGSQAEAEPA EGDRVNLSGM LALFERLAKQ TTEQGRAARV VYASSVAALG ESLPPSVDEH TLPRPTMSYG VHKLVGELIL ADWTRRGKLD GRALRLPGIV ARPVLSAGHG SAFMSQIFRA AQSGQSYTCP VAPSATVWWM SRRCCVDNLL HAGRMSAEGL HVGRVWTPPV LHLSVQEIVD ALVRRFGSFD IDYAPVERIE RLFGRQPPLT DRRAIEAGFR NDGTIDALVT HALERE
|
| |