| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4819 |
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| Symbol | |
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| ID | 6180594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1958126 |
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| End bp | 1959796 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641684575 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001811486 |
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| Protein GI | 172063835 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAATG AGATGACGCA TCATCGCAAG TCCATCGGAA CATTCGATTA CATCGTGATA
GGCGCTGGCA CGGCAGGATG CGCGCTGGCC AGCCGACTCA GCGAGGACCC TCGAACATCG
GTGCTCCTGC TGGAGGCAGG TGGCAAGGAT GACTATCACT GGATTCACGT GCCGGTCGGC
TACCTCTACT GCATCGACAA CCCGCGCACG GACTGGCGTT TCCGCACGGA ACGCGAAGCG
GGGCTGAACG GCCGCGCCCT CGGTTACCCG CGTGGTCGCG TGCTGGGAGG TTGTTCGTCG
ATCAACGGCA TGATCTACAT GCGCGGCCAA CGGGAAGACT ACGATGAATG GGCCCGTCTT
ACCGACGATG CGGGCTGGCA GTGGAATTCG GTGTTGCCTC TGTTCCGGCG CAGCGAAGAC
TACCACGGCG GCGCAAGCGA TCTGCACGGA AGCGGGGGGC CATGGCGGGT CGAAAAACAG
CGTCTGAACT GGCCGATTCT CGAGATTTTC TCTCAGGCCG CACAACAGAT CGGCATCCCG
GCAACGCAGG ACTTCAATGG CGGCGACAAC AACGGTGTCG GCTACTTCGA TGTGAACCAG
CGACGCGGCG TTCGCTGGAA CGCAGCCAAG GCGTTTCTGA GACCCGCCAC CGCTCGCCGC
AACTTGACCA TCGTCACCCT CGCGCAGACC GAGCGCCTTC GATTCGACGG AACGCGATGT
GTCGGAGTCG ACGTGCGGGT CGGCGACGAA CCTATGCTTG CCACGGCGAA TCGGGAGGTC
ATCTCGTGTG CCGGCGCGGT CAACTCACCG AAGCTGCTCG AGCTGTCCGG CATCGGCGAT
CCGGATCGCC TGGGCGCGCT CGGCATCCCT GTGCGGGTCG CGCGTCGAGG CGTTGGAGAA
AATCTCCAGG ATCATCTGCA ACTCCGCATG GTGTTTCGCA TCGACGGTGC AAAGACACTC
AATACGCTCA GTGCGTCCTG GTGGGGAAAG CTGCGGATCG GCATGGAGTA CGCGGCGAAG
CGCAGCGGCC CGATGGCGAT GGCTCCGTCG CAGCTCGGCA TTTTCACCTC GGTGGATCCG
AACCACGCGA AGATCCGACC AGATGTTCAG TACCACGTGC AGCCGCTGTC GCTCGACCGC
TTCGGCGAGC CCCTGCACAA GTTCGACGCG ATCACGGCCT CGGTATGCCA GTTGCGGCCC
ACCTCCCGAG GCACCATTCA CGCGGTATCC GCGGACCCGT TCGCACCGCC CCGCATCGCT
CCGAACTATC TGTCGACCGA ATTGGACCGC GCGGTTGCGG CCAATGCCTT ACGCCTCACG
CGACGTATCG TGGCGGCACC CGCCATGGCG CCGTTCAAGC CGCGCGAAAT CCTGCCCGGT
ATCGCGTTCC AGAGCGAGGA CGAACTCCGT CAAGCAGCAG GCGACATCGG CACGACGATC
TTCCATCCGG TCGGAACCTG TCGGATGGGG CGCCTGGACG ACGCGGATGC CGTTGTCGAT
TCGCGACTGC GCGTGATCGG CGTACCGGGC CTTCGCATCG CCGATGCGTC GATCATGCCC
ACCATCACGT CCGGCAACAC GAACTCGCCG ACCTTGATGA TTGCCGAACA CGCGAGCGAC
CTGATCCGAG AGGATTGGGC CCGGCCGCAA TCCCGAAACG GTCCGCCATG A
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| Protein sequence | MRNEMTHHRK SIGTFDYIVI GAGTAGCALA SRLSEDPRTS VLLLEAGGKD DYHWIHVPVG
YLYCIDNPRT DWRFRTEREA GLNGRALGYP RGRVLGGCSS INGMIYMRGQ REDYDEWARL
TDDAGWQWNS VLPLFRRSED YHGGASDLHG SGGPWRVEKQ RLNWPILEIF SQAAQQIGIP
ATQDFNGGDN NGVGYFDVNQ RRGVRWNAAK AFLRPATARR NLTIVTLAQT ERLRFDGTRC
VGVDVRVGDE PMLATANREV ISCAGAVNSP KLLELSGIGD PDRLGALGIP VRVARRGVGE
NLQDHLQLRM VFRIDGAKTL NTLSASWWGK LRIGMEYAAK RSGPMAMAPS QLGIFTSVDP
NHAKIRPDVQ YHVQPLSLDR FGEPLHKFDA ITASVCQLRP TSRGTIHAVS ADPFAPPRIA
PNYLSTELDR AVAANALRLT RRIVAAPAMA PFKPREILPG IAFQSEDELR QAAGDIGTTI
FHPVGTCRMG RLDDADAVVD SRLRVIGVPG LRIADASIMP TITSGNTNSP TLMIAEHASD
LIREDWARPQ SRNGPP
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