| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4771 |
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| Symbol | |
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| ID | 6181238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1907577 |
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| End bp | 1908830 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684530 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001811441 |
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| Protein GI | 172063790 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTCG ATTCCCGCCA GCTCGCGACG CTCGCCCAGC AATACGGCAC CCCGCTGTGG
GTGTACGATG CCGACGTCAT ACGCGACCGC ATCGCCCAAC TGCGTCAGTT CGACGTGATC
CGCTACGCGC AGAAAGCGAA CTCGAACCTG CATATCCTGA AGCTGATGCG CGATGAACGC
GTGTGCGTCG ACGCCGTGTC GCTCGGCGAG ATCGAGCGCA GCCTCGCGGC GGGGTTCAGT
CCGGCAGGCG GTCCTGCTTC CGGCGATCCG GAAGGCGTCG TGTTCACGGC CGACCTGATC
GACCGCCCGA CGCTCGCCGC CGTGCTGAAG CACGGCGTGA CCGTGAACGC CGGCTCGCTC
GACATGCTGG CACGTGTCGG CGAGCATGCG CCCGGCCATC GCGTGTGGCT GCGCGTGAAT
CCCGGCTTCG GCCACGGCCA CAGCAACAAG ACCAATACCG GCGGCCCCCA AAGCAAGCAC
GGGATCTGGA TCGACGACGT GCCGCGCGCG ATCGAGATCG TGCGCCAGTA CGGGCTGAAG
CTGGTCGGCA TCCACATGCA TATCGGCTCG GGCGTCGACT ATGGCCACCT GTCGCAGGTG
TGCGACGCGA TGGTCGACCT CGTCACGTCG CTCGGCCATG ACATCGAAGC GATTTCCGCT
GGCGGCGGCC TGTCGATTCC GTATCGCGAC GGCGAGCCGC GCGTGGACGT CGGCCACTAC
TTCAGCCAGT GGGATGCGGC GCGCAAGCGG ATCGAACGGC ATCTCGGCCA TGCGGTGCGC
ATCGAGATCG AGCCGGGCCG CTTCCTCGTC GCCGAGGCCG GTACGCTCGT CACCGAAGTG
CAGGCCGTGA ACCATCGGCC GAAGCACGAC TTCGTGCTGA TCGATGCGGG CTTCAACGAC
CTGATGCGTC CGTCGATGTA CGGCAGCTAC CACGCGGTGT CCGTGCATGC GCCGGACGGC
GCGCTGCCGG CCGGCCGGCC GCTCGTCGAC ATCGCGATCG CGGGGCCCCT GTGCGAGTCC
GGCGACGTGT TCACGCAGGA CGCGGGCGGA GTAGTCACGC ACCGCAAGCT CGCGCAACCG
CAGATCGGCG ACCTGCTGTT CCTGCACGAT GCGGGCGCAT ACGGCGCATC GATGTCCTCG
AACTACAACA GCCGGCCGCT CGCGCCTGAA GTGCTGGTCG ATCGCGGCAC GCCGCGGCTG
ATCCGCCGCC GGCAGACGAT CGGCGAACTG CTCGCGCTCG AAACGTTCGA GTAA
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| Protein sequence | MPLDSRQLAT LAQQYGTPLW VYDADVIRDR IAQLRQFDVI RYAQKANSNL HILKLMRDER
VCVDAVSLGE IERSLAAGFS PAGGPASGDP EGVVFTADLI DRPTLAAVLK HGVTVNAGSL
DMLARVGEHA PGHRVWLRVN PGFGHGHSNK TNTGGPQSKH GIWIDDVPRA IEIVRQYGLK
LVGIHMHIGS GVDYGHLSQV CDAMVDLVTS LGHDIEAISA GGGLSIPYRD GEPRVDVGHY
FSQWDAARKR IERHLGHAVR IEIEPGRFLV AEAGTLVTEV QAVNHRPKHD FVLIDAGFND
LMRPSMYGSY HAVSVHAPDG ALPAGRPLVD IAIAGPLCES GDVFTQDAGG VVTHRKLAQP
QIGDLLFLHD AGAYGASMSS NYNSRPLAPE VLVDRGTPRL IRRRQTIGEL LALETFE
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