| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4760 |
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| Symbol | |
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| ID | 6179987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1897507 |
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| End bp | 1899237 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684519 |
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| Product | Alpha,alpha-trehalase |
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| Protein accession | YP_001811430 |
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| Protein GI | 172063779 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1626] Neutral trehalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.726427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAC GTCGTGCCGC ATCGATCGCA TCGCATCCTG CTTCGCACTC GCACTCGCAC
TCGCACTCGC ACTCGTTCGC GCCCGTGCCG CGCATGCGTT GGGCCGCCGT CCTGGCCGTC
GCGTACCTGG CCGTGGCCGG GTGTGCGGCG CAAGCCGACA GCGCAAACCA CGCAGCTACG
CAGCCGGCCG TGCCAGCCTC GGCGGCGCTC GCGAGTCCGG CCTCCGGCAG CTCGCTGCTG
CCGCCGCCGA GCCAGCTCTA CGGCGACCTG TTCGTCGCGG TGCAGACCGC GCAGCTCTAT
CCCGACCAGA AGACCTTCGT CGATGCGACG CCCGATACCG ATCCCGCGAC GATCATGCAG
TTGTATCAGC AACAGAAGTC GCAGCCGGGC TTCTCGCTGA AGGCGTTCGT CGACCAGCAC
TTCACGCCGC CGCCGTCAGG CGGCGTCACG CCGCCCGCGA ACCAGACGCT GCGCCAGCAC
ATCGACTGGC TGTGGCCGCA GCTCACGCGC ACCAGCACGA CGGTGCCGCC GTACAGTTCG
CTGATCCCGA TGCCGAAGCC GTACGTGGTG CCGGGCGGCC GCTTCCGCGA GGGCTACTAC
TGGGATACCT ATTTCACGAT GCTCGGGCTG CAGGTGTCGG GGCGCGAGGA TCTCGTCGAC
GACATGCTCG ACAACTTCGC GCATCTGATC GACACGATCG GCCACATCCC GAACGGCAAC
CGCACGTACT ACGCGAGCCG CTCGCAGCCG CCGTTCTTCG CGTACATGGT CACGCTCGCC
GCGCAGGCCG AAGGCGACAC GGTCTACCAG AAATACCTGC CGGCGCTGCG CAAGGAGTAT
GCGTACTGGA TGCAGGGCGA GACCACGACG CCGCGCGGGC AGGCTGCGCG CCACGTGGTC
GCGATGCCGG ACGGCGCGGT GCTGAACCGC TACTGGGACG CGAGCGACAC GCCGCGCGAC
GAGTCGTATT TCGAGGACGT GACGACCGCG AAGGCCGTGC CGGACCGCCC CGCGAACGAG
GTGTACCGCG ACCTGCGCGC GGGCGCCGAA AGTGGCTGGG ACTACAGCTC GCGCTGGTTC
GGCGACGGCA AGACGCTCGC GACGATCCGC ACGACGTCGA TCGTGCCGGT CGACCTGAAC
AGCCTGATGT TCCATCTCGA GACGACGATC GTGAAGGGCT GCGCGGTCAC GCACGATATC
GCGTGCGTCG CGGACTTTTC CGCACGGGCG GGCCGCCGCG CGGCCGCGAT CAACCACTAT
CTGTGGAATC GTCACGGCTA TTACGGCGAC TACGACTGGC AGTTGCGCAA GCCGCGCGAC
GGCATGACGG CCGCCGCGCT GTATCCGCTG TTCACGAGTG TCGCGTGGCC CGAGCGCGCG
AAGGCGACCG CGCGCGAGGT GCGCAAGACG CTGCTGCAGC CGGGCGGCCT CGCGACGACG
ACCGTGAACA CCGGCCAGCA GTGGGATGCG CCGAACGGCT GGGCGCCGCT CCAGTGGATC
GCGATCGAAG GGCTGCGCCG TTACGGCGAC CCGGCGCTCG CGAAGGACAT CGGCACGCGC
TTCCTGACCG ACGTGAAGCA TGTGTATGCG ACCGAAGGCA AGCTCGTCGA GAAGTACGTG
GTCGAGGGGA CGGGCGCGGG CGGCGGCGGG GGCGGCGAAT ATCCGCTGCA GGACGGCTTC
GGCTGGACCA ACGGCGTCAC GCTGAAACTG CTCGGGCTGT ATGGCGAGTG A
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| Protein sequence | MTSRRAASIA SHPASHSHSH SHSHSFAPVP RMRWAAVLAV AYLAVAGCAA QADSANHAAT
QPAVPASAAL ASPASGSSLL PPPSQLYGDL FVAVQTAQLY PDQKTFVDAT PDTDPATIMQ
LYQQQKSQPG FSLKAFVDQH FTPPPSGGVT PPANQTLRQH IDWLWPQLTR TSTTVPPYSS
LIPMPKPYVV PGGRFREGYY WDTYFTMLGL QVSGREDLVD DMLDNFAHLI DTIGHIPNGN
RTYYASRSQP PFFAYMVTLA AQAEGDTVYQ KYLPALRKEY AYWMQGETTT PRGQAARHVV
AMPDGAVLNR YWDASDTPRD ESYFEDVTTA KAVPDRPANE VYRDLRAGAE SGWDYSSRWF
GDGKTLATIR TTSIVPVDLN SLMFHLETTI VKGCAVTHDI ACVADFSARA GRRAAAINHY
LWNRHGYYGD YDWQLRKPRD GMTAAALYPL FTSVAWPERA KATAREVRKT LLQPGGLATT
TVNTGQQWDA PNGWAPLQWI AIEGLRRYGD PALAKDIGTR FLTDVKHVYA TEGKLVEKYV
VEGTGAGGGG GGEYPLQDGF GWTNGVTLKL LGLYGE
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