Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4756 |
Symbol | |
ID | 6179932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1892595 |
End bp | 1894241 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641684515 |
Product | natural resistance-associated macrophage protein |
Protein accession | YP_001811426 |
Protein GI | 172063775 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACGC CATCCAACGT CTCTCCACCG ATCGCCGTCG AGCGCAGCGC CGTGCTCGAC GAAGCACATC TGGGCGACAT CCGCGGTGCC CTCGGCACGA TCGCGCATCA CGACACCGCC GCGCGGCGCA CGTGGTGGGC GCGGCTGCGC ACGCTGCTCG CGATCATCGG CCCCGGCCTG ATCGTGATGG TCGGCGACAA CGACGCGGGC GCATTCGGCA CCTACACGCA GGCCGGCCAG AACTACGGCA CGACGCTGCT GTGGACGCTG CTGCTGCTGG TGCCCGTGCT GTACGTGAAC CAGGAAATGG TGCTGCGCCT CGGCGCGGTC ACGCGCGTCG GCCATGCGCG CCTGATCTTC GAGCGCTTCG GCCGGTTCTG GGGTGCGTTC AGCGTGATCG ACCTGTTCCT GCTCAATGCG CTGACGATCG TCACCGAGTT CATCGGCATC ACGTTCGTGC TGGCTTTCTT CGGGCTCCCG AAGGTTGCGG GCGTGTGCGT GGCGGCCGCG CTGACGATGG CCGCGGTGAG TACCGGCGAC TTCCGGCGCT TCGAGCGGTT CGCGATCGTG CTGTGCGTGC TGAGCCTGCT GCTCGTGCCG GTGCTCGTGT CGATCCACCC GCCGGTGTCG CAGATGTCGC GCGACTTCTT CGTGCCGACC TGGCCCGCGC ACGCGAAGCT GTCCGACGTG ATGCTGCTCG TGATCGGCAT CGTCGGCACG ACGGTCGCGC CGTGGCAGCT GTTCTTTCAG CAGAGCTACG TGATCGACAA GCGCATCACG CCGCGCTTCA TGAAGTACGA GAAGGTCGAC CTGTGGATCG GCATCGCGTT CGTGCTGATC GGCGCGGTCG CGATGATCGG CTTCAGCGCC GCGCTGTTCG GCGGTCATCC GGAAGCAGGC AACTTCACCG ATGCGGGCGG CGTGATCGCG GGCCTCGAGA AGTATGCGGG CCGCACGGGC GCGACGCTGT TCGCGGTCGC GCTGCTCGAC GCGTGCATCA TCGGCGCGGC GGCGGTGTCG CTGTCGACGG CATACGCGAT CGGCGACGTG TTCAAGATCC GTCATTCGCT GCATCGCGGC GTGTCCGATG CGAAGGGCTT CTATCTCGTC TACTTCGGGA TCGTCGCGGC CGCCGCCGCG CTCGTGCTGA TCCCCGGCAG CCCGCTCGGC CTGTTGACCG AAGCGGTGCA GACGCTCGCG GGCGTGCTGC TGCCGAGCGC GACGGTGTTC CTGCTCGTGC TCTGCAACGA TCGCCAGGTG CTCGGTCCGT GGGTCAACTC GACGCGGCTC AATGTATTTA CGGGCGCGGT GATCTGGGTG CTCGTGCTGC TGTCGATCAT CCTGACCGCG TCGGTGATGT ATCCGGACAT CAGCGGCGAA GCGATCGTCG ACGTGCTGGT CGGCGGCACG GTGCTCGCGA TCGCCGGCTA TCTCGCGACG GTGCTGATCC GCCGCAACAA GCGCGTCGTC GAGCCGGGCA TCGATCGTGC GGCGCGCGAC ACGTGGCGCA TGCCGCCGCT CGACTCGCTC GAGCCGCAGA AGATGACGGT CGCGACGCGT GTGTGGATGG CCGTGCTGCG CGGCTATCTG GTGGTCGCGG TCGGTCTCGT GATCGTCAAG GTCGTGCAGA TGACGCTGAT GAAGTAG
|
Protein sequence | MSTPSNVSPP IAVERSAVLD EAHLGDIRGA LGTIAHHDTA ARRTWWARLR TLLAIIGPGL IVMVGDNDAG AFGTYTQAGQ NYGTTLLWTL LLLVPVLYVN QEMVLRLGAV TRVGHARLIF ERFGRFWGAF SVIDLFLLNA LTIVTEFIGI TFVLAFFGLP KVAGVCVAAA LTMAAVSTGD FRRFERFAIV LCVLSLLLVP VLVSIHPPVS QMSRDFFVPT WPAHAKLSDV MLLVIGIVGT TVAPWQLFFQ QSYVIDKRIT PRFMKYEKVD LWIGIAFVLI GAVAMIGFSA ALFGGHPEAG NFTDAGGVIA GLEKYAGRTG ATLFAVALLD ACIIGAAAVS LSTAYAIGDV FKIRHSLHRG VSDAKGFYLV YFGIVAAAAA LVLIPGSPLG LLTEAVQTLA GVLLPSATVF LLVLCNDRQV LGPWVNSTRL NVFTGAVIWV LVLLSIILTA SVMYPDISGE AIVDVLVGGT VLAIAGYLAT VLIRRNKRVV EPGIDRAARD TWRMPPLDSL EPQKMTVATR VWMAVLRGYL VVAVGLVIVK VVQMTLMK
|
| |