| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4728 |
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| Symbol | |
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| ID | 6179335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1849485 |
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| End bp | 1850162 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684487 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001811398 |
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| Protein GI | 172063747 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.825096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.434564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAAAT TCAGTATTCG CACTGTTTTC GCGTACGATT GGCCGCTGAC ACTCGCGGGC
ATGGAACACA TTGCCGGCGA CGCGTGCGCG ATCGATCTCG TCGGCGTCTC CCGGACCCCG
GACGAACTGG TCGACGCGCT CGGCCGCATC GACTGCGACG TCGTGCTGGT CGACTATGCG
ATCGGCCAGG ACGCGCGGAT GGACGGCCTC GCGCTGTTCG ACTGGCTGCG CCGTTCGCGC
CCGAACGTCG GCATCGTCGC GCTGGTCGGC AACGAGAATC CGGTGATCTT CCGCTCGATC
CTCGCGCAAG GCGGCGCGAG CCTCGTCAGC AAATTCGACG ACGTCGGCCA CATCGTCACC
GCGATCCATT CGAGCTACAG CGGCGGGCGC TACCTGTCGC CGCTCGTCCG GCGCGCACTC
GAGGCGCTCG CCGAACACGA CCAGCCACCG GTGAAGCTGT CGACGCGCGA AATCGAGGTG
ATTCGCCTCT ATCTGGCCGG CGTGCCGATC AAGACGATCG CGCAGCGGCT GAACAAGGGG
AAGCAGACGG TCAGCGCGCA GAAGATCAGC GCGATGAAGA AACTCGGCGT GACCAACGAC
ATCGAGCTGG TCCAGCGGGC GGCCGGGCTG GGCTTTGGCG GCGGCGGGGG CACGAGCCAG
CCGGTCGGCG CGGGGTAA
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| Protein sequence | MGKFSIRTVF AYDWPLTLAG MEHIAGDACA IDLVGVSRTP DELVDALGRI DCDVVLVDYA
IGQDARMDGL ALFDWLRRSR PNVGIVALVG NENPVIFRSI LAQGGASLVS KFDDVGHIVT
AIHSSYSGGR YLSPLVRRAL EALAEHDQPP VKLSTREIEV IRLYLAGVPI KTIAQRLNKG
KQTVSAQKIS AMKKLGVTND IELVQRAAGL GFGGGGGTSQ PVGAG
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