| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4712 |
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| Symbol | |
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| ID | 6181405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1831204 |
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| End bp | 1833447 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641684471 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001811382 |
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| Protein GI | 172063731 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.779821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCC GTCCTGACGA GCTGAAGCTC GGCAAATTCA CCACCCTGTG CAGCGTGCTC
GCCGCGAGCC CCGCGTTCGC CGACGGCACG CCGTCGCCCG CTCCGGTCAG CACCGAAGGC
CATCTCGCGC CGATCGAGAT CCAGGGCAAG ACCGAGCACA GCTACAAGGC CGACTTTTCC
GCCTCCGCGA AATTCACCGC GCCGCTCGTC GACACGCCGA AGTCGGTGAC CGTGATCCCG
CAGGAACTGA TCCAGAACAG CGGTGCGGCG ACGCTGACCG AAGCGCTGCG CACCGTGCCC
GGCATCACGT TCGGCGCGGG CGAAGGCGGC AACCCGCTCG GCGATCGTCC GTTCATCCGC
GGCTACGACT CGCAAGGCAG CATGTTCGTC GACGGGATGC GCGACACGGG CGCGACCACC
CGCGAGATCT TCAACACCGA GCGCATCGAG ATCACCAAGG GTTCCGACGG CGCGTACGGC
GGCCGCGGCG GCGCGGGCGG CAGCATCAAC CTGATCACCA AGGTTCCGCA CCTCGGCACG
ACGGCCGCCG CGAGCGCGGG CCTCGGCACC GACCGCTATC GCCGCTTCAC GGCCGACGGC
AACTGGCAGT TCGCCGATCA CGCCGCGTTC CGCCTGAACC TGATGAGCCA CAACAACGAC
GTCGCCGGCC GCGACGTCGT CAACAACGAG CGCTGGGGCG TCGCGCCGTC GATCGCGTTC
GGTCTCGGCA CGCCGACGCG CGTGACCGCG AGCTACTACC ACCTGTCGAC CGACGACATG
CCCGACGGCG GCATTCCGTA CTTCTACACG ACATCGAACA AGCCCGCGAA CGTCGACACG
ATCTATCCGG CGCCCGTCGA TCGCCACAAC TTCTACGGCC TGATCGACCG CGACTTCCGC
AAGACCACGT CCGACATCAG CACGATCCGG ATCGAGCACG ACATCACGCC GGGGCTGACG
GTGCGCAACA CCACGCGCTA TACGGAATCG ACGCAGGACT ACATCTGGAC GCAGCCCGAC
GACAGCCAGG GCAACGTGGT GAACGGCAAG GTCTGGCGCC GCAACAACAA CCGCGACAGC
TCGATCAACA GCCTCGCGAA CCTGACCGAA TTGTTCGGCG AATTCCGTAC CGGCCCGTTC
AAGCACAGTT TCACGACCGG CATCGAACTG TCGCGCGAAT GGGGCAAGCG CGATTCGTAC
AAGGTGGCGA CCGACACCGG CAAGATCTGC CAGAAGGGCA TCGGCGCCGC ATCGGGCTAC
AACTGCACGA GCCTGTGGTC GCCGAACCCG AGCGATCCGT GGGCCGGCTC GGTCACGCGC
AACAACGATA ACGCGCATGC GCGCACCACG ACGAAGTCGA TCTACGGCTT CGACACGATC
GAGATCACGC CGCGCTGGCA AGTGAACGCC GGCGTGCGCG TCGACGACTA CTCGACCCGC
TTCACCGACA CCAAGGCCAA CGGCGGCAAG ACCTACACGC GCGACGACAC GCTCTTCAAC
TGGCAGGCCG GCCTCGTGTT CAAGCCCGCG CAAAACGGCA GCGTCTACGC GTCGTATGCG
ACGTCGTCGA CGCCGGCCGG CATGCTGCTC GGCGAAGGCA GCGAAACGCA GTCGCTCACG
CCGGGCCGCG GCGGCGTCGG GCCGAACGTC GACCAGATGG CGCCGGAAAA GAACCGCAGC
ATCGAGCTCG GCACGAAATG GAACGTGCTG AACGACCAGC TCGCGCTCAC CGCCGCGCTG
TTCCAGATCG ATACGACGAA TGCGCGCGTG ACGCTGCCGA ACAACCAGTA CGCGATGGTC
GGCAACAAGC GCGTGCAGGG TCTCGAGCTT GGCGTCGCCG GCCAGATCAC GAAGCAATGG
CAGGTGTTCG GCGGCTACAC GTACATGAAG AGCGAGCTGC GCGACAACGG CAAGGACGCC
GCGAACAACG GCCACCGCTT CCCGAACACG CCGAAGCACA GCCTGACGAT GTGGTCGAAC
TACGACGTGA CGCCGAAGTT CACCGTCGGC GGCGGCGCGT TCTACATGTC GGAAGTGTTC
GGCGATCCGG CGAACTTGCG GGCGGTGCCG TCGTACTGGC GCTTCGACGC GATGGCGCAG
TACCGGATCA ACAAGAAGCT CGACCTGCAG TTCAACGTGA ACAACCTGTT CAACCGCACG
TACTTCGATC AGGCGTATCC GGCGCACTAC GCGTCGATTG CGCCGGGCCG CTCGGCGTTC
ATCACGCTGA ATGCGCGCTA CTGA
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| Protein sequence | MKSRPDELKL GKFTTLCSVL AASPAFADGT PSPAPVSTEG HLAPIEIQGK TEHSYKADFS
ASAKFTAPLV DTPKSVTVIP QELIQNSGAA TLTEALRTVP GITFGAGEGG NPLGDRPFIR
GYDSQGSMFV DGMRDTGATT REIFNTERIE ITKGSDGAYG GRGGAGGSIN LITKVPHLGT
TAAASAGLGT DRYRRFTADG NWQFADHAAF RLNLMSHNND VAGRDVVNNE RWGVAPSIAF
GLGTPTRVTA SYYHLSTDDM PDGGIPYFYT TSNKPANVDT IYPAPVDRHN FYGLIDRDFR
KTTSDISTIR IEHDITPGLT VRNTTRYTES TQDYIWTQPD DSQGNVVNGK VWRRNNNRDS
SINSLANLTE LFGEFRTGPF KHSFTTGIEL SREWGKRDSY KVATDTGKIC QKGIGAASGY
NCTSLWSPNP SDPWAGSVTR NNDNAHARTT TKSIYGFDTI EITPRWQVNA GVRVDDYSTR
FTDTKANGGK TYTRDDTLFN WQAGLVFKPA QNGSVYASYA TSSTPAGMLL GEGSETQSLT
PGRGGVGPNV DQMAPEKNRS IELGTKWNVL NDQLALTAAL FQIDTTNARV TLPNNQYAMV
GNKRVQGLEL GVAGQITKQW QVFGGYTYMK SELRDNGKDA ANNGHRFPNT PKHSLTMWSN
YDVTPKFTVG GGAFYMSEVF GDPANLRAVP SYWRFDAMAQ YRINKKLDLQ FNVNNLFNRT
YFDQAYPAHY ASIAPGRSAF ITLNARY
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