| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4648 |
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| Symbol | |
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| ID | 6180979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1760729 |
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| End bp | 1761364 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641684407 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001811318 |
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| Protein GI | 172063667 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCATT ACGACAAGCG CATCTATTGC CTGTACCGTG AGGCAGGGCT GGCTGTGCGG
CGCCGTCGCA AGCGCCAGGG CGTCATGATT GAGCGCGAGC AACTGGCATT GCCGGGCGCG
CCCAACGAGG TGTGGTCAAT CGATTTCGTG ATGGACGCGC TTTCCAACGG CCGGCGCGTG
AAGTGCCTGA CCGTCGTCGA CGACTTCACG AAAGAGGCTG TCGACATCGT CGTCGACCAT
GGCATCTCAG GTTTGTATGT CGCTCGGGCA TTGGACCGTG CAGCTCGCTT CCGTGGCTAT
CCCAAGGCAG TGCGAACAGA CCAGGGCCCC GAATTTACGA GCCGCGCGCT TGACCAGTGG
GCGTATGCGA ACGGCGTCAC ACTGAAGTTG ATTCAGGCGG GCAAGCCAAC GCAGAATGCG
TACATCGAAT CGTTCAACGG CAAGTTCCGC GACGAATGCC TTAATGAGCA CTGGTTCACG
ACGCTCGCGC ACGCTCGGGC TGTCATCGCG GCATGGCGTC AGGACTACAA CGAGCAAAGG
CCGCACAGCG CACTGAACTA CCTTGCGCCG TCAGAGTTTG CGGCGAAACA TCGGGCAACC
GCGGATGCTC CTGCCGCTTT CCAGGAGTTG GTTTAA
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| Protein sequence | MLHYDKRIYC LYREAGLAVR RRRKRQGVMI EREQLALPGA PNEVWSIDFV MDALSNGRRV
KCLTVVDDFT KEAVDIVVDH GISGLYVARA LDRAARFRGY PKAVRTDQGP EFTSRALDQW
AYANGVTLKL IQAGKPTQNA YIESFNGKFR DECLNEHWFT TLAHARAVIA AWRQDYNEQR
PHSALNYLAP SEFAAKHRAT ADAPAAFQEL V
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