| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4634 |
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| Symbol | |
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| ID | 6180052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1745779 |
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| End bp | 1746516 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684393 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811304 |
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| Protein GI | 172063653 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.821225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATA GGGTGAAAGT TGCGCTCGTC ACCGGCGCGT CGGGCGGCAT CGGCAAGGCG
GTCGCGCTGC GACTCGCGAC GGACGGATTT GCGATCGTGG GCCACTACGC CGGAAACGGC
GCCGGGATGG ACGCCCTCGT GTCGGACATC ACCGCCCGAG GCGGGCGGGC AATCGCGGTC
AAGGGCGATA TCAGCGCGGC GGACGATGTC GCCGCGCTCT ATGACCGTGC GCTGGATGCA
TTCGGCCGGC TCGATGTGGT CGTCCATTGC GCGGGCATCA TGCCGCTCGC ACCGATCGGC
CCGGACGGTC TGGACGTATT CGACAGGACG ATTCAGGTCA ATCTGCGCGG CAGCTACCTC
GTCATGGCGC ATGCCGCGTC GCATCTGCGC GACGGCGGCC GTATCGTCGT CTGCTCCAGC
AGTGTCGTCG CCAAGTCGTT CCCCGGCTAC GGCGCCTACA TCGCGTCGAA GGCCGGCGGC
GACGGGCTGG TGAGAGTGCT GGCCAACGAG ATGCGGGGGC GGCGGATTAC GGTTAACGCG
GTCGCACCCG GGCCGGTCGC GACGGAGTTG TTCCTGAAAG GAAAGACGGA CGAGCAGATC
GAACGGCTTG CGCACCTCGC ACCGCTCGAG CGGCTCGGCC AGCCGGACGA TATTGCGGGA
ACGGTAGCGT TTCTCGTCGG CGCGGACGGC CAGTGGATCA ACGGTCAGAT TCTTTATGCC
AACGGCGGTT TTGCCTGA
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| Protein sequence | MSDRVKVALV TGASGGIGKA VALRLATDGF AIVGHYAGNG AGMDALVSDI TARGGRAIAV
KGDISAADDV AALYDRALDA FGRLDVVVHC AGIMPLAPIG PDGLDVFDRT IQVNLRGSYL
VMAHAASHLR DGGRIVVCSS SVVAKSFPGY GAYIASKAGG DGLVRVLANE MRGRRITVNA
VAPGPVATEL FLKGKTDEQI ERLAHLAPLE RLGQPDDIAG TVAFLVGADG QWINGQILYA
NGGFA
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