| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4621 |
|---|
| Symbol | |
|---|
| ID | 6179731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1730331 |
|---|
| End bp | 1731152 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641684380 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001811291 |
|---|
| Protein GI | 172063640 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGC TCGTATTGAA AGACGGGACC GAACTGTTCT ACAAGGACTG GGGCTCAGGC
CAGCCGGTGG TGTTCTCGCA TGGATGGCCG TTGAATGCCG ATGCATGGGA TGCACAGATG
ATGTATCTCG CCGAGCGAGG CTATCGTGTG ATCGCGCACG ACCGGCGTGG GCACGGCCGC
TCCAGTCAAC CCTGGGGCGG AAACGAGATG TCGCGTTACG CGGACGATCT CGCCGAACTG
ATCGAATATC TCGATCTGAA GGACGCGGTG CTCGTCGGTC ATTCGACCGG AGGTGGCGAG
GTTGCCCGTT ATATCGGCCG GCACGGCACC GGTCGTGTCG CGAAGGCCGT ATTGATCGCC
GCGGTGCCGC CGCTGATGCT GAAGACCGAC GCCAATCCCG GCGGCTTGCC GTTGTCGGTG
TTCGACGACA TCCGAAAGGG CGTCCTCGCG AACCGCTCGC AGTTCTTCAA GGACCTGGCG
GTGCCGTTTT ACGGCTTCAA CCGCGACCAC GCAAAGGCGT CGGACGGGAC GCTGGATGCC
TTCTGGTACG CGGGTATGCA ATGTTCGATC AAGAGCGCGT ACGACTGCAT CAAGGCGTTC
TCGGAAACCG ACTTCACCGC CGATTTGCGC AGCATCGACG TTCCGACGCT GATCCTGCAA
GGCGATGCCG ATCAGATCGT CCCGCTGGAC GATTCCGGCC GGCTGTCGGC AGAGATCGTT
CGCGGGGCGC GGCTGACGAT CTATCCCGGC GCGCCGCACG GCTTGTGCAC CACGCATGCC
GATCAGGTGA ACGCGGATTT GCTCGCGTTC ATCCGCGCAT GA
|
|---|
| Protein sequence | MATLVLKDGT ELFYKDWGSG QPVVFSHGWP LNADAWDAQM MYLAERGYRV IAHDRRGHGR
SSQPWGGNEM SRYADDLAEL IEYLDLKDAV LVGHSTGGGE VARYIGRHGT GRVAKAVLIA
AVPPLMLKTD ANPGGLPLSV FDDIRKGVLA NRSQFFKDLA VPFYGFNRDH AKASDGTLDA
FWYAGMQCSI KSAYDCIKAF SETDFTADLR SIDVPTLILQ GDADQIVPLD DSGRLSAEIV
RGARLTIYPG APHGLCTTHA DQVNADLLAF IRA
|
|---|
| |