| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4589 |
|---|
| Symbol | |
|---|
| ID | 6180336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1694957 |
|---|
| End bp | 1695355 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641684349 |
|---|
| Product | GreA/GreB family elongation factor |
|---|
| Protein accession | YP_001811260 |
|---|
| Protein GI | 172063609 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.020326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00331531 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAC GCCTTTACCA GCTGAGCGAA GTCGACGTCG CTCGCCTTGA GAAGCACGCC
GAACACAACC CGCGCTTCCA GGCGATGCTC GACACGCTGC TCGAGCGCGC GGACATCGTC
CAGCCCGACG CCATCAAGGC GAACGTCGTC ACGATGAACT CGCAGATCAC GCTGCTCGAC
GAAGCATCCC AGGAACAGAC CACCTGGACG ATTGTTTATC CGGATGCCGC CAATCTCGAA
CTCGGGCGCC TGAACGTGTT CTCGCCGGTC GGCATGGCGC TGCTGGGCAC GCAACGCGGT
CAATTGGTGA AGGTGCTGCA GCCGAGCGGC GCCGAAAAGC TGATGAAGGT CGCGGCGATC
GTGTTCCAGC CGGAAGCCAA CGGCGAATAC ACGCGCTGA
|
|---|
| Protein sequence | MKQRLYQLSE VDVARLEKHA EHNPRFQAML DTLLERADIV QPDAIKANVV TMNSQITLLD
EASQEQTTWT IVYPDAANLE LGRLNVFSPV GMALLGTQRG QLVKVLQPSG AEKLMKVAAI
VFQPEANGEY TR
|
|---|
| |