| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4581 |
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| Symbol | |
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| ID | 6179664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1688500 |
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| End bp | 1689219 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684342 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001811253 |
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| Protein GI | 172063602 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000141763 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000089809 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAATTAC GCTGGCAGGA TGCCTACCAA CAATTCAGTG CCGCGGAAGA CGAGCAGCAG
CTCTTCCAGC GGATCGCTGC CTATTCTAAA CGCCTCGGCT TCGAATATTG CTGTTACGGC
ATTCGCGTGC CGCTGCCCGT ATCGAAGCCG GCCGTCGCGA TCTTCAATAC CTATCCGGAC
GGCTGGATGG CGCGCTACCA GGCGCAGAAC TACATCGAGA TCGATTCGAC GGTCCGCGAC
GGCGCGCTGA GCACCAACAT GATCGTGTGG CCGGACGTCG ACCGGATCGA TCCGTGCCCG
TTGTGGCAGG ACGCGCGCGA CTACGGGCTG TCGGTGGGCG TCGCACAGTC GAGCTGGGCG
GCGCGCGGCG CGTTCGGGCT GCTGAGCATC GCCCGTCATG CGGACCGGCT CACGCCGGCC
GAGATCAACA TGCTGACGCT GCAGACGAAC TGGCTCGCGA ACCTGTCGCA TTCGCTGATG
AGCCGCTTCA TGGTGCCGAA GCTGTCGCCG GAGTCGAGCG TCACGCTCAC AGCGCGCGAG
CGCGAGGTGC TGTGCTGGAC GGCCGAAGGC AAGACCGCGT GCGAGATCGG CCAGATCCTC
AGCATCTCGG AGCGCACGGT CAACTTCCAC GTGAACAACA TCCTCGAGAA GCTCGGCGCG
ACGAACAAGG TCCAGGCAGT CGTCAAGGCG ATCGGGGCCG GACTCATCGA CACGCCCTGA
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| Protein sequence | MELRWQDAYQ QFSAAEDEQQ LFQRIAAYSK RLGFEYCCYG IRVPLPVSKP AVAIFNTYPD
GWMARYQAQN YIEIDSTVRD GALSTNMIVW PDVDRIDPCP LWQDARDYGL SVGVAQSSWA
ARGAFGLLSI ARHADRLTPA EINMLTLQTN WLANLSHSLM SRFMVPKLSP ESSVTLTARE
REVLCWTAEG KTACEIGQIL SISERTVNFH VNNILEKLGA TNKVQAVVKA IGAGLIDTP
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