Gene BamMC406_4570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4570 
Symbol 
ID6181373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1676238 
End bp1676555 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content65% 
IMG OID641684331 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001811242 
Protein GI172063591 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0919723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000210645 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGAAC AATGGATTTG CGCCGGACAC GCCGGCGCGC TGTCGGAAGA CGCGCCGATC 
GAGTTCAAGC GGACCGACGG CGTCGAAATC GGGATCTACC GCGTCGGCGA CGAGGTGTAT
GCGCTCGAGA ACGTGTGCCC GCATGCGTAC GCGCTGCTGA CGCAGGGCTT CGTCGACGAG
GGCACGGTCG AATGCCCGCT GCACGAGGCC GTGTTCGACA TCAAGACGGG CGAATGCCTG
AAGGGCCCGG GCGGGCGCGC GCTGAAGCAG TACGCGGTGC GCCTGGCCGG CGAGGAAATC
CAGATCAAGG TGGAATGA
 
Protein sequence
MSEQWICAGH AGALSEDAPI EFKRTDGVEI GIYRVGDEVY ALENVCPHAY ALLTQGFVDE 
GTVECPLHEA VFDIKTGECL KGPGGRALKQ YAVRLAGEEI QIKVE