| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4566 |
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| Symbol | |
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| ID | 6180030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1673470 |
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| End bp | 1673997 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684327 |
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| Product | cupin 2 domain-containing protein |
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| Protein accession | YP_001811238 |
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| Protein GI | 172063587 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0464338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000237614 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGGACG CAGATCTCGA ACGCAAGTCG TGGGACCAGC CGGAAGACGC AAGCTTCGGC
GACTGGATGG AAGGGCGCGT CGCGCGCTAC GCGACGCGGC GCTACGACTG GGACGCGCTG
AAGTTCCAGG CCGACTACGA CCCGAAGTAC CGCCGTGCGC AGATGCGCTA TGTCGGCACG
GGCGGCACGG GCGTCGCGAA GGACGTCAAC ACGGTACCGG CCGGCAACTT CACGTTTTCG
ACGATGGTCA TCCCGGCCGG CAACATCGGC CCGAGCCACA TCCACACCGA CGTCGAGGAA
ATCTTCTTCG TGCTGCGCGG CAAGATGAAG GTGATCTGCG AGCGCGACGG CGAGACCTGG
GAAGCGATCC TCGGCGAGCG CGACCTGATC TCGGTGCCGC CGGGCGTGTA TCGCACGGAA
ATCAACATCG GCGAGGAAGA CGCGCTGATG TGCGTGATGC TCGGTTCGGC GAAGCCCATC
ACGCCGACTT ATCCGCCGGA TTCGCCGCTC GCGAAGATCA AGCGCTGA
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| Protein sequence | MADADLERKS WDQPEDASFG DWMEGRVARY ATRRYDWDAL KFQADYDPKY RRAQMRYVGT
GGTGVAKDVN TVPAGNFTFS TMVIPAGNIG PSHIHTDVEE IFFVLRGKMK VICERDGETW
EAILGERDLI SVPPGVYRTE INIGEEDALM CVMLGSAKPI TPTYPPDSPL AKIKR
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