Gene BamMC406_4565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4565 
Symbol 
ID6180029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1672539 
End bp1673450 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content73% 
IMG OID641684326 
Productalpha/beta hydrolase fold 
Protein accessionYP_001811237 
Protein GI172063586 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0422308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000747551 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGTCA TCGACAAACG TGAACGCGAC CGCACCGCGG CATTCGCCGC GCTGCTCGGG 
CAGTTTCCCG AACAGCGCTG CGCGGCCGGC GCGGCGGGCA CGATCGGTTA CCGTGAGGCT
GGCGCAGGCG AGGCCGGCGC GCAGCATGCG GGCCACGCGC TGCCCGTCGT GCTGCTGCAC
GGGATCGGCT CGGGCGCCGC ATCGTGGGTG TGCCAGCTCG ACACGCTCGG CGCGTCGCGA
CGCGTGCTCG CGTGGGATGC GCCCGGCTAC GGCGTGTCGA CCCCCGTGCA CGGCGCGTCG
CCGAGCGCCG CCGATTACGC GGCGTCGCTG AACGCGTGGC TCGAGGCACT CGGCATCGAA
CGCTGCGTGC TGGTCGGGCA TTCGCTCGGC GCGATCATCG CGGGTGGCTT GTGCCGCCTG
ATGCCCGCGC GGATCGCCGG CCTGCTGCTG ATCTCGCCCG CGGGCGGCTA CGGCCGCGCG
CCCGTCGAAA CGCGCGACAC GCGCCGCGAC GCGCGCCTCG CGATGCTTGA CGAACTCGGT
CCGGCCGGGC TCGCCGAGCA GCGCAGCGGC AACATGCTGT CGGGTTTCGC GAGCGAGGAT
GCGCGTGCGT GGGTGCGCTG GAACATGGCG CGCATCGTGC CGGCCGGCTA TGCGCAGGCC
ACGCATCTGC TCGCGAACGC CGATCTCGCG ACCGATCTCG CCGGCTTTCG CGGCCGCGCG
GCCGTGGCCG TCGGCGCGAA CGACGCGATC ACGCCGCCCG CCGCGTGCGA GCGGATCGCC
GCGGCCGCGC AGGTCGAGCT GCAGGTAATT CCGCAGGCTG GCCATGCCGG CTACGTGGAA
GCGCCGGCCG TCTATTCATC GCTGATCGAC ACGTTCTGTC GTCAGTGCGA CACGCAGCGA
GGCATGGCAT GA
 
Protein sequence
MSVIDKRERD RTAAFAALLG QFPEQRCAAG AAGTIGYREA GAGEAGAQHA GHALPVVLLH 
GIGSGAASWV CQLDTLGASR RVLAWDAPGY GVSTPVHGAS PSAADYAASL NAWLEALGIE
RCVLVGHSLG AIIAGGLCRL MPARIAGLLL ISPAGGYGRA PVETRDTRRD ARLAMLDELG
PAGLAEQRSG NMLSGFASED ARAWVRWNMA RIVPAGYAQA THLLANADLA TDLAGFRGRA
AVAVGANDAI TPPAACERIA AAAQVELQVI PQAGHAGYVE APAVYSSLID TFCRQCDTQR
GMA