Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4565 |
Symbol | |
ID | 6180029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1672539 |
End bp | 1673450 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641684326 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001811237 |
Protein GI | 172063586 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0422308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000747551 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGTCA TCGACAAACG TGAACGCGAC CGCACCGCGG CATTCGCCGC GCTGCTCGGG CAGTTTCCCG AACAGCGCTG CGCGGCCGGC GCGGCGGGCA CGATCGGTTA CCGTGAGGCT GGCGCAGGCG AGGCCGGCGC GCAGCATGCG GGCCACGCGC TGCCCGTCGT GCTGCTGCAC GGGATCGGCT CGGGCGCCGC ATCGTGGGTG TGCCAGCTCG ACACGCTCGG CGCGTCGCGA CGCGTGCTCG CGTGGGATGC GCCCGGCTAC GGCGTGTCGA CCCCCGTGCA CGGCGCGTCG CCGAGCGCCG CCGATTACGC GGCGTCGCTG AACGCGTGGC TCGAGGCACT CGGCATCGAA CGCTGCGTGC TGGTCGGGCA TTCGCTCGGC GCGATCATCG CGGGTGGCTT GTGCCGCCTG ATGCCCGCGC GGATCGCCGG CCTGCTGCTG ATCTCGCCCG CGGGCGGCTA CGGCCGCGCG CCCGTCGAAA CGCGCGACAC GCGCCGCGAC GCGCGCCTCG CGATGCTTGA CGAACTCGGT CCGGCCGGGC TCGCCGAGCA GCGCAGCGGC AACATGCTGT CGGGTTTCGC GAGCGAGGAT GCGCGTGCGT GGGTGCGCTG GAACATGGCG CGCATCGTGC CGGCCGGCTA TGCGCAGGCC ACGCATCTGC TCGCGAACGC CGATCTCGCG ACCGATCTCG CCGGCTTTCG CGGCCGCGCG GCCGTGGCCG TCGGCGCGAA CGACGCGATC ACGCCGCCCG CCGCGTGCGA GCGGATCGCC GCGGCCGCGC AGGTCGAGCT GCAGGTAATT CCGCAGGCTG GCCATGCCGG CTACGTGGAA GCGCCGGCCG TCTATTCATC GCTGATCGAC ACGTTCTGTC GTCAGTGCGA CACGCAGCGA GGCATGGCAT GA
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Protein sequence | MSVIDKRERD RTAAFAALLG QFPEQRCAAG AAGTIGYREA GAGEAGAQHA GHALPVVLLH GIGSGAASWV CQLDTLGASR RVLAWDAPGY GVSTPVHGAS PSAADYAASL NAWLEALGIE RCVLVGHSLG AIIAGGLCRL MPARIAGLLL ISPAGGYGRA PVETRDTRRD ARLAMLDELG PAGLAEQRSG NMLSGFASED ARAWVRWNMA RIVPAGYAQA THLLANADLA TDLAGFRGRA AVAVGANDAI TPPAACERIA AAAQVELQVI PQAGHAGYVE APAVYSSLID TFCRQCDTQR GMA
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