Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4557 |
Symbol | |
ID | 6181396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1663172 |
End bp | 1664572 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684318 |
Product | major facilitator transporter |
Protein accession | YP_001811229 |
Protein GI | 172063578 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00783301 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACTT TCGACAACGT CGTGGCCGGC AGGGCCACGA TGGAAGCTGC CGCCTCCACG CCCGGCGCGA TCATCGCGCG GCTCGAGCGG CTTCCGGCCA ACGCGATGCA GATCCGCGCG CGCGTGCTGA TCGGCACCGC GACGTTCTTC GACGGCTTCG ACGTGATCAC GATCGCGGCG ACGCTGCCGC TGCTGATTCA CAAGTGGGGG CTGTCGCCGA CGCAGATCGG CATGCTGATC GCGTCCGGCG CGATCGGCCA GCTGATCGGC GCGTTCCTGT TTCCCGCGCT CGCGGAGAAG CATGGCCGCG TGAAGGCCAT CGCGTGGAGT TCCGCCGTGA TCGGCGTCAC CAGCATCGCG TGCGGCTTCG CGCCGACGTT CGAGATCTTC GTGCTGCTGC GGATCCTGCA GGGGCTCGGG CTGGGCGGCG AGCTGCCGGT CGCCGCGACC TACATCAACG AGATCACGCG TGCGCACGGC CGCGGCCGCT TCGTGCTGCT GTACGAGATC GTGTTTCCGA TCGGCCTGCT GGTGTCGATG GCGCTCGGCG CGTGGCTCGT GCCGCGGTTC GGCTGGGAAA TCATGTACTT CGTCGGCGGG CTGCCGCTGA TCCTCGCGCT GGTGCTCACG CGCCTCGTGC CGGAATCGCC GCGCTGGCTC GCATCGCGCG GGCGCCTCGC GGAAGCGGGG CGTGCGGTCG GCGTGTTCGA AGCGTCGGTG CGCGGCGAGC TGCCGCCGGC GACGCAGGCG GCCGCGTTCG ACGAGATGGT GCGCCAGCAC CCGAAGCGCC GGATGAGCGA CCTGTTCAGC GCCGCGTATC GCAAGCGCAC GCTCGCGGTG GCGACGCTGT GGGCGACCTG CGGGTTCATC CAGTACGGAT TGTCGACGTG GCTGCCGACG ATCTACAAGA ACTTCTATCA TGCGCCGCTG CAGCTCGCGC TGAATCTCGC GGTGATTGGC TCGGTGATGG GCGTGCTCGG TTCGCTCGCG TCGGCGCTGC TCGTCGACAA GCTCGGCCGC AAGCCGGTGA TCGTCTGGTC GTTCGTGCTG TGCGCGCTGT CGCTGGCGCT GGCGGGTGTC TACCACGCGT CGTCGGTGTA TGTCGTCGCG ACCTTCTGCT CGTTGTCGCT GGGGCTGATG GCATCGGGCT TCATCACGGC CTACGTCTAT ACGCCGGAGC AGTATCCGAC GAGCATCCGC GCGTCCGGCT GCGGGCTCGG CAGCGCATGG CTGAAGATCG CATCGTTCGC GGCGCCGATG ATCGTGCCGC ACGCGATCAT CGGCGGCAAC CTCGCGCCGG CGTTCTACCT GATCGGCATC GTGCCTCTGA TTGCGGCGCT GACCGTCCAC TTCGTCGGGA TCGAGACGAA GGGCAAGGTG CTGGAGGCAC TGGAGGCATA A
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Protein sequence | MSTFDNVVAG RATMEAAAST PGAIIARLER LPANAMQIRA RVLIGTATFF DGFDVITIAA TLPLLIHKWG LSPTQIGMLI ASGAIGQLIG AFLFPALAEK HGRVKAIAWS SAVIGVTSIA CGFAPTFEIF VLLRILQGLG LGGELPVAAT YINEITRAHG RGRFVLLYEI VFPIGLLVSM ALGAWLVPRF GWEIMYFVGG LPLILALVLT RLVPESPRWL ASRGRLAEAG RAVGVFEASV RGELPPATQA AAFDEMVRQH PKRRMSDLFS AAYRKRTLAV ATLWATCGFI QYGLSTWLPT IYKNFYHAPL QLALNLAVIG SVMGVLGSLA SALLVDKLGR KPVIVWSFVL CALSLALAGV YHASSVYVVA TFCSLSLGLM ASGFITAYVY TPEQYPTSIR ASGCGLGSAW LKIASFAAPM IVPHAIIGGN LAPAFYLIGI VPLIAALTVH FVGIETKGKV LEALEA
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