Gene BamMC406_4536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4536 
Symbol 
ID6180435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1639254 
End bp1640708 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content66% 
IMG OID641684297 
Productarginine/ornithine antiporter 
Protein accessionYP_001811208 
Protein GI172063557 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.266081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC TGATTCACAC CGATACTGCG CGACCCGCCA CGCGCAAGCT GCAGCTCGGC 
GCGCTGACCG CCCTCGTCGT CGGCTCGATG ATCGGCGGCG GCATCTTCTC GCTGCCGCAG
AACATGGCTG CCGCAGCCGA CGCCGGCGCG ATCCTGATCG GATGGGGCAT CACCGCGGTC
GGCATGCTTG CCCTCGCGTT CGTCTTCCAG ACACTCGCGA ACCGCAAGCC GCTGCTCGAC
GGCGGTGTCT ACGCGTATGC GCAGGCCGGG TTCGGCGATT ACATGGGCTT CTCGTCCGCA
TGGGGCTACT GGATCAGCGC GTGGGTCGGT AACGTCGGCT ACTTCGTGCT GTTGTTCTCG
ACGCTCGGCT ACTTCTTCCC GATGTTCGGC GAAGGCAACA CGCGCGCCGC GATCGCGGCC
GCTTCGGTGC TGCTGTGGGC CGTCCATTTC CTCGTATTGC GCGGCATCCG GGAAGCGGCG
TTCGTCAACC TCGTCACGAC CGTCGCGAAG ATCGTCCCGC TCGTGGTGTT CATCGCGATC
GGCTTCGTCG CGTTCCGGCT CGACGTGTTC CGAGCCGACA TATGGGGCCA CGCGAATCCG
TCGCTCGGCT CGGTGACGAA CCAGATCCGC AGCATGATGC TCGCCACCGT GTGGGTGTTC
ATCGGCATCG AGGGCGCCAG CATCTACTCG GCGCGCGCCG AGAAGCGCAG CGACGTCGGC
CGTGCGACCG TGATCGGCTT CGCCGGCGTG CTGCTCGCGC TCGTGCTCGT CAATCTGCTG
TCGCTCGGCA TCATGACGCA GCCGCAGCTC GCGAAGCTTC AGAACCCGTC GATGGCCGCC
GTGCTCGAGC ATGTGGTCGG ACATTGGGGC GCCGTCGTCA TCGGCGTCGG CCTCGTGGTG
TCGCTCGTCG GCGCGCTGTT GTCGTGGGTA CTGCTCTGCG CGGAGATCCT GTTCTCTGCC
GCAAAGGACC GCACGATGCC CGCGTTCCTG CGCAAGGAGA ACGCGAACCA CGTGCCGGCC
AACGCGCTGT GGCTCACGAA CGTGATGGTG CAGATTTTCC TCATCATCAC GCTGTTCGCC
CAGGGCACCT ATCTGTCGCT GATCTATCTG TCGACGTCGA TGATCCTGAT CCCGTACTTC
TGGTCGGCCG CCTATGCGCT CCTGCTCGTC GTGCGCGGCG AAACCTATGG AGCCGACGCC
CGCGCACGCC GCAAGGACGG CTGCATCGCC GCGCTCGCGG TGACGTACAC GATGTGGCTG
CTCTACGCGG CAGGCGTCAA GTACCTGCTG CTGTCTGCCC TGCTCTACGT GCCGGGCGCG
CTGCTGTTCG CGAAGGCGAA GCGCGAACTC GGCAAGCCGG TGTTCACGAC CGCCGAAAAA
ATCGTTTTTG CGGCGGCCGC CGTCGCGGCC GTTGTCGCGG CCTATGCGCT CCATCGCGGT
CTCATCTCCC TTTGA
 
Protein sequence
MAELIHTDTA RPATRKLQLG ALTALVVGSM IGGGIFSLPQ NMAAAADAGA ILIGWGITAV 
GMLALAFVFQ TLANRKPLLD GGVYAYAQAG FGDYMGFSSA WGYWISAWVG NVGYFVLLFS
TLGYFFPMFG EGNTRAAIAA ASVLLWAVHF LVLRGIREAA FVNLVTTVAK IVPLVVFIAI
GFVAFRLDVF RADIWGHANP SLGSVTNQIR SMMLATVWVF IGIEGASIYS ARAEKRSDVG
RATVIGFAGV LLALVLVNLL SLGIMTQPQL AKLQNPSMAA VLEHVVGHWG AVVIGVGLVV
SLVGALLSWV LLCAEILFSA AKDRTMPAFL RKENANHVPA NALWLTNVMV QIFLIITLFA
QGTYLSLIYL STSMILIPYF WSAAYALLLV VRGETYGADA RARRKDGCIA ALAVTYTMWL
LYAAGVKYLL LSALLYVPGA LLFAKAKREL GKPVFTTAEK IVFAAAAVAA VVAAYALHRG
LISL