| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4519 |
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| Symbol | |
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| ID | 6181211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1623725 |
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| End bp | 1624705 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684280 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001811191 |
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| Protein GI | 172063540 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0796811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.833846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGTT TCACCCGCTG GATCACCCGC ACCGCCGCCG TCGCGCTCGT TGCGCTCGCC
GCCACGTCGA CCTTCGCGCA GGGCGGCGCC GACAAGGTCG TGCGCATCGG CTACCAGAAG
GCCGGCCTGC TGTCGATCAT CAAGGCGCAA GGCTCGCTCG AAGCGCGGCT CAAGCCGCTC
GGCTATGGCG TGCAGTGGTT CGAATTCCCC GCTGGCCCGC AATTGCTCGA AGCGTTGAAC
GCGAACAGCA TCGACTTCGG CTATACGGGC GCGCCGCCGC CCGTGTTCGC GCAGGCGGCC
GGCGTGCGGT TCGTCTATGT CGGCGCGGAG CCACCGGCCC CGCACAACGA AGCCGTGTTC
GTGAAGGCCG ATTCGCCGAT CCGGTCGGTC GCCGGCCTGC GCGGCAAGAA GGTCGCGCTG
CAGAAAGGCT CGAGCGCGAA CTACCTGCTG CTCGAAGCGC TGAAGAAGGC CGGCGTCCGC
TACGACGAAA TCCACCCCGT GTATCTCGCG CCGGCCGACG CGCGTGCGGC GTTCGAGAGC
GGCAACGTCG ACGCGTGGGT CGTATGGGAT CCGTACTATG CAGCCGCGCA GAATGCGCTG
AAGGTGCGCA CGCTGTCCGA CTACACGGGG CTCGCGGCGA CCAACAACTT CTACGAAGCG
ACACGCGACT TCGCGCAGCA GCATCCGGAC GTGGTCGGCG CGATCCTGAA ACAGGCGCGC
GAAACGGGCC AGTGGGTCAA CGGACATCCG GCCGATACGG CCGCGCTGCT CGCGCCGAAG
GTCGGCCTGC CGCAACCGCT CGTCGAGACG TGGATCAAGC GCGTGCCGTT CGGCGCGGTG
CCGCTCGACG ACCGGCTCGT CGCGGCGCAG CAGCGGGTTG CCGATGCATT CCATACGGCG
AAGTTGATTC CGCAAAAGCT GAGCGTCGCG GAGAATGCGT GGATCGACAC GAACGTCGCG
AGTGCGCTCG CGGCGAAGTA A
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| Protein sequence | MIRFTRWITR TAAVALVALA ATSTFAQGGA DKVVRIGYQK AGLLSIIKAQ GSLEARLKPL
GYGVQWFEFP AGPQLLEALN ANSIDFGYTG APPPVFAQAA GVRFVYVGAE PPAPHNEAVF
VKADSPIRSV AGLRGKKVAL QKGSSANYLL LEALKKAGVR YDEIHPVYLA PADARAAFES
GNVDAWVVWD PYYAAAQNAL KVRTLSDYTG LAATNNFYEA TRDFAQQHPD VVGAILKQAR
ETGQWVNGHP ADTAALLAPK VGLPQPLVET WIKRVPFGAV PLDDRLVAAQ QRVADAFHTA
KLIPQKLSVA ENAWIDTNVA SALAAK
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