| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4495 |
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| Symbol | |
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| ID | 6181095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1595590 |
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| End bp | 1596744 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684256 |
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| Product | porin |
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| Protein accession | YP_001811167 |
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| Protein GI | 172063516 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC ACGTCATTTT TGCCGCCGCG CTGGCAGCGT TCGCCGCGCC GGCCTTCGCG
CAGGACAGCG TGACGCTGTA CGGCCTGATC GACGAAGGCT TCAACTACAC GAACAACGTG
AATGTGCATG GAGTCGGAAA AACGGATTAC CAGCTGGCGA GCGGCTATGC GCAGGGCAGC
CGCTGGGGCC TGAAGGGCAG CGAGGAACTG GGCGGCGGCC TGAAGGCGAT CTTCACGCTG
GAAAACGGCT TCGACGTGAA CAACGGCCGG TTCAACCAGG GCGGCCGGAT GTTCGGCCGC
CAGGCGTTCG TCGGGCTGAG CGCGTCGCGT TTCGGCACGC TCACCTTCGG CCGCCAGTAC
GATTCCGTCG TCGACTATCT CGCGCCGCTG ACCGCGAACG GCAACTGGGG CGGCACGCTG
TTCTCGCACC CGTTCGACAA CGACAACACG GACAACTCGT TCCGCGTCAA CAACACGGTC
AAGTACGCGA GCCCCGACTG GAACGGGCTG TCGTTCGGCG GCACCTACAG CTTCAGCAAC
AGCACGGGCT TCGCGACCAA CCGCCAGTAC AGCCTCGGCG CGCAGTACTC GCTCGCCGGG
CTGCAGGTCG CGGCCGCGTA TCTGCAGGCG AACAGCCCGG GCGTCGGCAA CGCGGGCGCG
ATCGCGGCCG ACGACGCGAA TTTCGTCGCC GACCGCCTGC GCATCTTCGG CGGCGGCATC
AACTATACGT TCGGCCCGGC GACGGTCGGC TTCGTCTATA CGAAGACCGA CGTGAAGAAC
CCGGTGTCGA CCGTCTACCT GCCGGCGTCG ACGTTCTCGG GCCTCGGGCT GACCGCAACG
AAGTTCCAGA ACTTCGAGAT CAACGGCAAG TACCAGCTCA CGTCCGATTT CTATCTCGGC
GCGCAGTACG TGTACACGGA CGGCAAGTTC GACGCCGCGA CCGGCTCGTT CAAGCCGAAA
TACCATACCG TCGGGCTGAT GGCCGACTAC AGCCTGTCCA AGCGTACCGA CGTCTATCTG
CAGGGCGCAT GGCAGAAAGT CGCCGGCGAC AAGACGGGCA CCGCGGCCGA CGGCGGCTAC
GTGGTCGGGA CGGACGGCCC GTCGTCGTCG TCGAACCAGT TCGCGGTGCG CGCCGCGATC
CGCCACAAGT TCTGA
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| Protein sequence | MKKHVIFAAA LAAFAAPAFA QDSVTLYGLI DEGFNYTNNV NVHGVGKTDY QLASGYAQGS
RWGLKGSEEL GGGLKAIFTL ENGFDVNNGR FNQGGRMFGR QAFVGLSASR FGTLTFGRQY
DSVVDYLAPL TANGNWGGTL FSHPFDNDNT DNSFRVNNTV KYASPDWNGL SFGGTYSFSN
STGFATNRQY SLGAQYSLAG LQVAAAYLQA NSPGVGNAGA IAADDANFVA DRLRIFGGGI
NYTFGPATVG FVYTKTDVKN PVSTVYLPAS TFSGLGLTAT KFQNFEINGK YQLTSDFYLG
AQYVYTDGKF DAATGSFKPK YHTVGLMADY SLSKRTDVYL QGAWQKVAGD KTGTAADGGY
VVGTDGPSSS SNQFAVRAAI RHKF
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