| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4469 |
|---|
| Symbol | |
|---|
| ID | 6179465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1567735 |
|---|
| End bp | 1568655 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641684230 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001811141 |
|---|
| Protein GI | 172063490 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3781] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.476961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.842377 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTC GGCCGCGCGA GCACTGGCTG AGGATGCTGC TTGTCTGGAA CGGGTCGGTG
CTGCCGACCA TCCTGCCGCA GCTCGTGCTG ACGCTCGCGA TCAGCCTCGT CGCGGTATGG
GGCGGCGGCC GCGTGCTCGG CGAGAAGGTG CCGCTGAACC CGACGCCGTT CACACTGATC
GGCCTCACGC TCGCGATCTT CGCGGGGTTT CGCAACAACG CGAGCTACGA GCGCTACCGC
GAGGGCCGGC AGCTGTGGGG CGGCGTGCTG ACCGCCACGC GCACGCTGGT GTCGCAAGCA
CTCTGCTACG GCGCGATCGA CGCCGACGAT GCCGCGCGGC ATGCGTTCGT GCGCAAGGTC
ATCGCGTTCG TCCATGCGCT GAAGCATCAG CTGCGCGGCA CCGACCCGGC GTCGGACCTG
CGCGCGCTGC TCGATGACGG AACCCATGCG CGCATCGTCG CCGCGCGGTA TGCGCCGATC
GCGATCGTTC ATGAACTGCG CGAGGCATTC GCCGCGCGCG CCGACGCCGG GCATCTCGCC
GATACGCGGC TCTGGATGCT CGACGCGCGC CTCGACGATC TCGTGTCGAT GGTGAGCGGC
TGCGAGCGCA TCGCATCGAC GCCGATCCCG TTCTCGTACG ACGTGCTGCT GCACCGGACC
ATCTACGCAT ACTGCGTGCT GCTGCCGTTC GGCCTGGTCG ACTCGATCGG CGCGGCGACG
CCGTTCGTCA CCGTGTTCGT TGCGTATACG CTGATCGCGC TCGACGCGAT CGCCCATGCG
ATCGCCGAAC CGTTCGGCGA CGGGCCGAAC CAGCTCGCGC TCGATGCGAT GACGCGGATG
ATCGAGCGCA CGCTGCTCGA ACTGAACCGC GAGCCGCTGC CGGCGGAAGC GACGCCCGGC
CCGGCGTATC GACTCACCTG A
|
|---|
| Protein sequence | MIVRPREHWL RMLLVWNGSV LPTILPQLVL TLAISLVAVW GGGRVLGEKV PLNPTPFTLI
GLTLAIFAGF RNNASYERYR EGRQLWGGVL TATRTLVSQA LCYGAIDADD AARHAFVRKV
IAFVHALKHQ LRGTDPASDL RALLDDGTHA RIVAARYAPI AIVHELREAF AARADAGHLA
DTRLWMLDAR LDDLVSMVSG CERIASTPIP FSYDVLLHRT IYAYCVLLPF GLVDSIGAAT
PFVTVFVAYT LIALDAIAHA IAEPFGDGPN QLALDAMTRM IERTLLELNR EPLPAEATPG
PAYRLT
|
|---|
| |