Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4467 |
Symbol | |
ID | 6179915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1563823 |
End bp | 1565244 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641684228 |
Product | transcriptional regulator |
Protein accession | YP_001811139 |
Protein GI | 172063488 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.652401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCGTT ACGAACAACT GGCCGACGAG CTGCAGACGC AGATCGAGCG CGGCGTATAC CGGCCGGGCG AGCGGATTCC GTCGGTGCGG CAGGCGAGCA GGCAGCAGCA GCTCAGCGTG ACGACCGTGC TGCGCGCGTA TCTCGTGCTG GAGAGCCGCG GCCTGATCGA GAGCCGGCCG CAGTCGGGTT ATTTCGTGCG GGCGCGGGTC ACGGAGCCGG CCGAGGCCGA GCTGCACACC TCGGCGCCGG CGGCCGAGCC GTCGGCGGTG GACGTGAGCC GGCTCGTGCT GTCGACGCTG CGCTCGATCG CGCGTGACGA CGCGGTGCCG CTCGGCTCGC CGTATCCCGA CGCGTCGCAG TTCCCGGTGC AGCGTCTTGC GCGCTACGCG CAGGCGATCG GACGGCGCCG CACGCGCTGG GGCGTGATCG ACGACCTGCC GCCCGGCAAC CAGGAACTGA TCCGCCAGAT CGCGCGGCGC TACGCGGAGC GCGGGATCGC GGTCGAGCCC GCCGAGATCG TGATGACGAT CGGCGCGACC GAGGCGATCA ACCTGTGCCT GCAGGCTGTC GCGCGGCCGG GCGATACGAT CGCCGTCGAG TCGCCGACGT TCTACGCGAT GCTGCACGCG ATCGAGCGGA TGGGCATGCG CGCGCTCGAG GTGGCGACGC ATCCGGGCGA CGGCATCGAT CTCGACGCGC TCGAACGGAT CCTCGAGCGC GAGCGCATCG CCGCGTGCAT GGTGATGCCG AATTTCCAGA ATCCGCTCGG CTTTCAGATG CCCGATGCGC GCAAGCGCGC GCTCGTCGAG TTGCTCGCGA AGCACGGCGT GCCCGCGATC GAGAACGACG TCTACCACGA GCTGCATTTC GGCGACACGA CGCCGAGCGC GCTGAAGTCG TACGATCGCG ACGGGCTCGT GCTGCATTGC GCGTCGTTCA CGAAGAGCCT GTCGCCGCGC TACCGGATTG GTTGGGCGAT GCCGGGCCGC TATCGCGACC AGGTCGAGAA GCTGAAATTC CTGAATACGC TCGCGACGCC CGCGATCGAG CAGCTCGCGA TCGCCGAATA CCTGAAGCAC GACGGCTACG ATTTCCACCT GCGGCGGATG CGCAAGCAGT ATGCGCAGCA GGCGAGCCTG ATGAGCGCGA TGGTGCGGCG TTTCTTCCCG GCGGGCACGC GGCTGTCGCA GCCGCAGGGC GGGTACGTGC TGTGGGTCGA GTTGCCGCCG CGGGTCGACG CGATGAAGCT GTATGCGCTC GCGCTCGCGC AGGGCATCAC GATCGGGCCC GGCCATATGT TCTCGGCGAG CGCCGATTAC CGGCATTTCA TCCGGCTCAA CTACAGCTAT CCGTGGTCGC GGCAGATCGA GGACGCGCTG AAGGTGGTGG GGCGGCTCGC GTCCGAGTGC GCGGCGCGGT GA
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Protein sequence | MKRYEQLADE LQTQIERGVY RPGERIPSVR QASRQQQLSV TTVLRAYLVL ESRGLIESRP QSGYFVRARV TEPAEAELHT SAPAAEPSAV DVSRLVLSTL RSIARDDAVP LGSPYPDASQ FPVQRLARYA QAIGRRRTRW GVIDDLPPGN QELIRQIARR YAERGIAVEP AEIVMTIGAT EAINLCLQAV ARPGDTIAVE SPTFYAMLHA IERMGMRALE VATHPGDGID LDALERILER ERIAACMVMP NFQNPLGFQM PDARKRALVE LLAKHGVPAI ENDVYHELHF GDTTPSALKS YDRDGLVLHC ASFTKSLSPR YRIGWAMPGR YRDQVEKLKF LNTLATPAIE QLAIAEYLKH DGYDFHLRRM RKQYAQQASL MSAMVRRFFP AGTRLSQPQG GYVLWVELPP RVDAMKLYAL ALAQGITIGP GHMFSASADY RHFIRLNYSY PWSRQIEDAL KVVGRLASEC AAR
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