| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4463 |
|---|
| Symbol | |
|---|
| ID | 6179538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1559661 |
|---|
| End bp | 1560116 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641684224 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001811135 |
|---|
| Protein GI | 172063484 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0490827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCACC GCATGACACC ACCACGCACA CCCGGCGTTT CCGCCGACAC CGTCGCAACC
GACCTGACCC TCGCGGTCGG CCAGCTGATC CGCCGGCTGC GCTCCGAGAT CGACTCCGAA
GGGCTCGGCA TGTCGCAGAC GAGCGCGCTC GCGCGGCTCG AACGACAGGG CCCGATGACG
ACCGCCGACC TCGCCCGCGC GGAGGCGATG AAGCCGCAGT CGATGAAGGC GATCCTCGCG
AGCCTCGAGG AAGACGGGCT CGTCGAACGC CAGCCGCATC CGACCGACGG CCGCCAGATC
CTGTTCCTGC TGACCGCGGC CGGCCGCGAA GCACGGCGCA AGCGCGACAC CGCGAAGCAC
AAGTGGCTCG GCGCCGCGAT CGACAAGCTC GACCCTGAAG AGATCCGCAC GCTCGCCGCC
GCGATTCCGC TGATCCGGCG CATCGGCGAA CAATGA
|
|---|
| Protein sequence | MLHRMTPPRT PGVSADTVAT DLTLAVGQLI RRLRSEIDSE GLGMSQTSAL ARLERQGPMT
TADLARAEAM KPQSMKAILA SLEEDGLVER QPHPTDGRQI LFLLTAAGRE ARRKRDTAKH
KWLGAAIDKL DPEEIRTLAA AIPLIRRIGE Q
|
|---|
| |