| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4457 |
|---|
| Symbol | |
|---|
| ID | 6179527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1553068 |
|---|
| End bp | 1555839 |
|---|
| Gene Length | 2772 bp |
|---|
| Protein Length | 923 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641684218 |
|---|
| Product | magnesium-translocating P-type ATPase |
|---|
| Protein accession | YP_001811129 |
|---|
| Protein GI | 172063478 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01524] magnesium-translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAC GTAAAACCAC GCAAAAGAAA CAGCGCGGCT TCATCAACGC CGGCCCCGGT
CAGCAGAACG AACCACGCAT CATGCGCGCC GCGCAGGAAG CGGCCCGCCC GCTCGAAGAA
ACCTTCAAGT CGCTGCGCAC CAGCACGCGC GGCCTGACCT ACGACCAGGC CGCCGATCGT
CTTCAGCACC ACGGTCCGAA CGAAATCGCG CACGACAAGC CGCCGCACTG GGCCCGCCAG
CTGCTGCACG CGTTCCACAA TCCGTTCGTC TATGTGCTGC TGGTGCTGGC CGCGATCAGC
TTCTGCACCG ACGTCTACTT CGCGGCGCCC GGCGAGCGCG ACTACGTCGG CATGGCGATC
CTGCTGACGA TGGTCACGAT CAGCGCGCTG CTGCGCTTCG TGCAGGAATT CCGTTCGCTG
CGTGCGGCCG AAAAGCTCAA GGCGATGGTC CGCACGACGG CGACCGTGCA GCGCGCGATG
ACCGACACGT CCGAGCCGGC GCGCCGCGAG GTGCCGATGC GCGAAGTGGT GGTCGGCGAC
ATCGTGCACC TGTCGGCCGG CGACATGATT CCCGCCGACG TGCGCCTGCT CGCGTCGCGC
GACCTGTTCA TCAGCCAGGC CGTGCTGACC GGCGAAGCGC TGCCGGTCGA GAAGTACGAC
ACGCTCGGCG CGGTCGCCGG CAAGTCGGCG CACACGGGCA TGGCCGGCAC GCCGGGCGCG
GCGAACGACG CGTCGACGTC GCTGCTCGAT CTCGAAAATG TGTGCTTCAT GGGCACCAAC
GTGGTAAGCG GCACCGCGAC GGCCGTCGTC GTCGCGACCG GCGAGGACAC CTACTTCGGT
TCGCTCGCGC GCAACGTCGT GAGCCACAAG CGGATCGAGA CGAGCTTCGA TCGCGGCGTC
GCGAGCGTGA GCTGGCTGCT GATCAAGTTC ATGTTCGTGA TGGTGCCGAT CGTGTTCATG
ATCAACGGCC TGACCAAGGG CGACTGGCTG AGCGCGCTCA CGTTCGCGCT CGCGGTGGCC
GTCGGCCTCA CGCCCGAGAT GCTGCCGATG ATCGTCAGCG CGAACCTCGC GCGCGGCGCG
ATCGCGATGG CGCGCCGCAA GGTCGTCGTG AAGCGGCTGA ACTCCGTGCA GAACTTCGGC
GCGATGGACG TGCTGTGCAC CGACAAGACC GGCACGCTCA CGCAGGACAA GATCATCCTC
GAGCACCATC TCGACCTGTC CGGCCACAAG AACGAGGACA TCCTGCGGCT CGGCTGGCTG
AACAGCTTCC ATCAGAGCGG CCAGAAGAAC CTGATCGACA TCGCCGTGGT CGCGCGCGCC
GACGAGATCG GCGAGCGCGT AAAGCCGCAG GGCTACAAGA AGATCGACGA GCTGCCGTTC
GATTTCGTGC GCCGTCGCCT GTCGGTCGTC GTCGAGGACA CGCACGGCAC GCACCTGCTG
ATCTGCAAGG GCGCGGTCGA GGAAATGCTC GCGGTGTCGA CCCATGTGCA GGACGAGGAC
GGCGTGCGCC CGCTCGACTT CGTCGCGCGC AAGCGGCTGC TCGAACAGGC GAACGCATAC
AACGAGGACG GCTTCCGCGT GCTGGTGCTC GCGACGCGCA CGATCCCGCG CGGCGACGAA
CGCGAGCAGT ACCGCACCGC CGACGAGCGC GACCTCGTCG TGCGCGGCTT CCTGACCTTC
CTCGATCCGC CGAAGGAATC GGCCGCGCCG GCGCTCGCCG CGCTGCGCGA GAACGGTGTA
TCGGTGAAGG TGCTGACGGG CGACAACCCG ACCGTCACGA TGAAGGTCTG CCGCCAGGTC
GGCCTCCAGC CGGGCAAGCC GGTGCTCGGC GCCGAAATCG AGGCGCTCGA CGACGCGACG
CTCGCGCAGG TCGTCGAACG CACGACGGTG TTCGCGAAGC TCACGCCGCT GCAGAAGGCG
CGCATCGTGA AGGCACTGCA GGCGAACGGC CACACGGTCG GCTTCCTCGG CGACGGCATC
AACGACGCGC CCGCACTGCG CGACGCCGAC GTCGGCATCT CGGTTGACAG CGGCGCCGAC
ATCGCGAAGG AAACCGCCGA CATCATCCTG CTCGAAAAGA GCCTGATGGT GCTCGAGGAA
GGCGTGATCA AGGGCCGCGA GACGTTCGGC AACATCCTGA AGTACCTGAA CATGACCGCC
AGCTCGAACT TCGGCAACGT GTTCTCGGTG CTCGTCGCCA GCGCGTTCCT GCCGTGGGAG
CCGATGCTCG CGACCCAGCT GCTGGTGCTG AACCTGATCT ACGACACGTC GCAGATGCTG
CTGCCGTGGG ACCGGATGGA TCCGGAATTC CTGAAGAAGC CGCGCAAGTG GGAAGCCGGC
AACATCGGCC GCTTCATGCT GTGGGTCGGG CCGACGTCGT CGGTGTTCGA CATCACGACG
TACATCCTGA TGTGGACCGT GTTCGGCGCG GGCGCGATGT ATCACCTGCA CGGCGGCACG
GGCGGCCAGG TCGTGATGAA CTCGGGCTGG TTCATCGAGA GCCTCGTGTC GCAGACGCTC
GTCGTGCATC TGCTGCGCAC GCAGAAGATC CCGTTCCTGC AGAGCACGGC CGCACTGCCG
GTGCTGCTGT CGACGTTCAC CGCGATCGCC ATTGGCTGCT GGCTGCCGTT CTCACCGTTC
GCGGATTCGC TCGGCTTCAT GCACCTGCCG GGCACCTACT GGCTGTGGCT CGCCGCGACG
ATGGTCGGCT ACATCCTGCT CGCGCAGATC GTCAAGACGA TCTATGTGCG TCGCTACAAG
CAGTGGTTCT GA
|
|---|
| Protein sequence | MTQRKTTQKK QRGFINAGPG QQNEPRIMRA AQEAARPLEE TFKSLRTSTR GLTYDQAADR
LQHHGPNEIA HDKPPHWARQ LLHAFHNPFV YVLLVLAAIS FCTDVYFAAP GERDYVGMAI
LLTMVTISAL LRFVQEFRSL RAAEKLKAMV RTTATVQRAM TDTSEPARRE VPMREVVVGD
IVHLSAGDMI PADVRLLASR DLFISQAVLT GEALPVEKYD TLGAVAGKSA HTGMAGTPGA
ANDASTSLLD LENVCFMGTN VVSGTATAVV VATGEDTYFG SLARNVVSHK RIETSFDRGV
ASVSWLLIKF MFVMVPIVFM INGLTKGDWL SALTFALAVA VGLTPEMLPM IVSANLARGA
IAMARRKVVV KRLNSVQNFG AMDVLCTDKT GTLTQDKIIL EHHLDLSGHK NEDILRLGWL
NSFHQSGQKN LIDIAVVARA DEIGERVKPQ GYKKIDELPF DFVRRRLSVV VEDTHGTHLL
ICKGAVEEML AVSTHVQDED GVRPLDFVAR KRLLEQANAY NEDGFRVLVL ATRTIPRGDE
REQYRTADER DLVVRGFLTF LDPPKESAAP ALAALRENGV SVKVLTGDNP TVTMKVCRQV
GLQPGKPVLG AEIEALDDAT LAQVVERTTV FAKLTPLQKA RIVKALQANG HTVGFLGDGI
NDAPALRDAD VGISVDSGAD IAKETADIIL LEKSLMVLEE GVIKGRETFG NILKYLNMTA
SSNFGNVFSV LVASAFLPWE PMLATQLLVL NLIYDTSQML LPWDRMDPEF LKKPRKWEAG
NIGRFMLWVG PTSSVFDITT YILMWTVFGA GAMYHLHGGT GGQVVMNSGW FIESLVSQTL
VVHLLRTQKI PFLQSTAALP VLLSTFTAIA IGCWLPFSPF ADSLGFMHLP GTYWLWLAAT
MVGYILLAQI VKTIYVRRYK QWF
|
|---|
| |