| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4338 |
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| Symbol | |
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| ID | 6180911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1421383 |
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| End bp | 1421913 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684104 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811015 |
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| Protein GI | 172063364 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.406205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGTCA ACAACGCGGC GGTGCTGATG TTCGGCGCGA TCACCGACTT GTCGAAACGC
GATTTCGAGC GTGCGGTATC GATCAATCTG GTCGGCACGT TCGTCGGGAT TCGCACGATC
GCGCCGCGCA TGATCGCGCG GCGGCGCGGG TCGACCGTCA ACATTTCGTC GGTGGACGGG
CTGCGCGGCG TGAACGCGCT GGCCGCTTAC GTGTCGAGCA AATGGGGCGT GCGCGGGCTG
ACGAAGGTCG CGGCGCTGGA ACTCGGCCAT CAGGCCGTGC GCGTGAATTC GATCCATCCG
GGCGGCGTGA ACACGGCGAT GTCGAACCCG ACCGGCGTAC CGCTCGACGA AGTCAACAAG
CACTACACGC ACGTGCCGCT GCAGCGCGTC GGCTTGCCTG ACGAAATCGC GCGCGCGACG
CTGTTCCTCG CGAGCGACGA AGCGTTGTAC TGCAACGGCG CCGAGCTGGC CGTCGACGGC
GGGATGGCCG CAGGCACGTA TTACCCCGGA TTGCCGGGCG CGCCGCTTTG A
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| Protein sequence | MLVNNAAVLM FGAITDLSKR DFERAVSINL VGTFVGIRTI APRMIARRRG STVNISSVDG
LRGVNALAAY VSSKWGVRGL TKVAALELGH QAVRVNSIHP GGVNTAMSNP TGVPLDEVNK
HYTHVPLQRV GLPDEIARAT LFLASDEALY CNGAELAVDG GMAAGTYYPG LPGAPL
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