Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4309 |
Symbol | |
ID | 6180184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1382316 |
End bp | 1382807 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641684076 |
Product | peptidoglycan-associated lipoprotein |
Protein accession | YP_001810987 |
Protein GI | 172063336 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0691285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA CGAACCGGTT TGCGGTCCTG GCAGCTTTCG CCCTGCTGGC GGGTTGTCAC CACGCGGCGA AAACGCCCGA GAATGCCGGC ATGGCGCCGA CACCCTCGAG CGAAGCGGTC GCGACGGTGA CGACCGACGA TCTGAACAAT CCGAACAGCC CGCTCGCCAA GCGCAGCGTC TATTTCGATT TCGACCAGTA CTCGGTGAAG CCGGAATACC AGTCGCTGCT GCAGTCGCAC GCCGACTACC TGCGCAACCA TCCGTCGCGC CGCGTGCTGA TCCAGGGCAA CACCGACGAG CGCGGCACGT CCGAATACAA CCTCGCGCTT GGCCAGCGCC GGTCGCAAGC CGTGATGAGC GCGCTCGAAA CGCTGGGCGT TCAGGCGACG CAACTCGAAG CGGTCAGCCT CGGCAAGGAA AAGCCGGTCG CGCTCGGCCA CGATGAAGAT TCGTGGGCGC AGAACCGCCG CGCCGATCTC GTCTATCGTT GA
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Protein sequence | MNKTNRFAVL AAFALLAGCH HAAKTPENAG MAPTPSSEAV ATVTTDDLNN PNSPLAKRSV YFDFDQYSVK PEYQSLLQSH ADYLRNHPSR RVLIQGNTDE RGTSEYNLAL GQRRSQAVMS ALETLGVQAT QLEAVSLGKE KPVALGHDED SWAQNRRADL VYR
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