Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4220 |
Symbol | |
ID | 6181413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1275402 |
End bp | 1276679 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641683989 |
Product | chloride channel core |
Protein accession | YP_001810900 |
Protein GI | 172063249 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.587227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.520774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTCG TCACCGTCCT GACCGGCATC GGCGCGGGCC TCGGCGGGAT GCTGCTCGCG CTGCTGTTGC ACGCGATCCA GCATGTCGCC TACGGCTACA GCCTGTCGCA CGTGGTCGGC ACCCAGAGCT TCCTCACGGG CGTGACGCTG GCCGACCCGT TGCGCCGGCT CGCGGTGCTC GTCGTCTGCG GGCTCGTCGC GGGCGGCGGC TGGTGGGCGC TCTACCGGTA CGGCCGGCCG CTCGTCAGCA TCCGCCGGGC AGTGCGTGCG GCCGATCCGC GGATGCCGTT CGTCAGCACG ACGGTTCACG CGCTGCTGCA GATCGTCACC GTCGCGCTCG GTTCGCCGCT CGGCCGCGAA GTCGCACCGC GCGAGATCGG CTCGCTGCTC GCCGGGCAGC TCGCGCACCG TGCGGGGCTC ACGTCCGCCG ACTGCCGGCT GATGGTCGCG TGCGGCGCGG GCGCCGGCCT CGCGGCCGTC TACAACGTGC CGCTCGGCGG CGCCGTGTTC GTGCTCGAAG TACTGCTCGG CACGTTCGAA TTGCGCGCGC TGGTGGTGGC CGTCGTCACG TCGGCGATCG CGGCGGCCGT CGCGTGGATC GGCCTCGGCA ACGAGCATCA GTACACGGTG CCTGCGTTCG TGCTGAGCAC GCCGCTCGTC GCATGGTCGA TCGTCTGCGG GCCGCTGTTC GGTTTCGCCG CATACGGTTT CGTGCGGCTC ACGACCCGGG CGCGGACGGA TGCGCCGAAG GGCCGGCTGC TGCCCGTGCT CGCGCTGGTC AACTTCGCGA CGATCGGTGT GCTCGCGATG CGGTTTCCGC AACTGCTCGG CAATGGCAAG GGGCCGGCTT CGCTGGGTTT CGACGGCTCG CTGACGATCG GCGTCGCGGC GACGCTGCTC GCGCTGAAGG TGCTGATCGA GGCGGGCAGC CTGCGTGCGG GCGCGGAGGG CGGGCTGCTG ACGCCGGGCC TCGCGAACGG TGCGCTGCTG GGCGTCGTGC TCGGCGGGGT GTGGGGCCTC GTGTGGCCGG GCGCGTCGAT CGGCGGATGC GCGCTGATCG GCGCGACCGC GTTTCTTGCC GCGTCGATGC AGATGCCGAT CACGGCCGTC GTGCTGCTGC TCGAATTCAC GCGCGTGAAT CACGACAGTC TCGTGCCGAT GCTGCTGGCC GTGGCCGGGT CGCTCGTCGC GCATCGCTTC GCGCAGCAAC TGGCCGAGCG CCGCGCGAAT GCGATAGCGA CGGTCGGCAC GCAGGAGACG GCGGCGGCGA TTCGCTGA
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Protein sequence | MAVVTVLTGI GAGLGGMLLA LLLHAIQHVA YGYSLSHVVG TQSFLTGVTL ADPLRRLAVL VVCGLVAGGG WWALYRYGRP LVSIRRAVRA ADPRMPFVST TVHALLQIVT VALGSPLGRE VAPREIGSLL AGQLAHRAGL TSADCRLMVA CGAGAGLAAV YNVPLGGAVF VLEVLLGTFE LRALVVAVVT SAIAAAVAWI GLGNEHQYTV PAFVLSTPLV AWSIVCGPLF GFAAYGFVRL TTRARTDAPK GRLLPVLALV NFATIGVLAM RFPQLLGNGK GPASLGFDGS LTIGVAATLL ALKVLIEAGS LRAGAEGGLL TPGLANGALL GVVLGGVWGL VWPGASIGGC ALIGATAFLA ASMQMPITAV VLLLEFTRVN HDSLVPMLLA VAGSLVAHRF AQQLAERRAN AIATVGTQET AAAIR
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