| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4200 |
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| Symbol | |
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| ID | 6179222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1253480 |
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| End bp | 1254439 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683969 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001810880 |
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| Protein GI | 172063229 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.90323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0968553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGAA TCGGCTTTTT GATCAGCGAC GGCTTCCAGA TCATGGCGCT CGCCGCGCAG
TCGGTGTTCG AGTACGCGAA CATGGGCGAC GGCGAACCGT TCTACGTGCT CGACAACTAT
TCCGTCGACG GCGGCGACGT GCGCTCGTCG CTCGGCTTGC CGGTCGCGAC GCGCGCGCTC
AGCGGGCGGC TCGACGTCGA TACGTGGATC GTCGCGGGCG TCAACGATCC GGTCGCATCG
CCGGCGCCGG CCGGCGTCGT CGCGTTCCTC CGCCGCCCGA ACGCGCGCGC GCGGCGAATC
GCCGGCATCT GTACGGGCGC GTTCGTGCTC GCCGAGGCCG GGCTGCTCGC GCAGCGTCGC
GCGACGACGC ATTGGGCGTA CGGCCGCGAC ATGCAGAAGC ACTTTCCGGA GGTTCGCGTC
GAGGAAGACC GGATCTACAT CGTCGACGGG CCGATCTGGA CGTCGGCCGG GATGACGGCG
GGCCTCGACC TGGCCCTCGC GATGGTGGAA AAGGATCTCG GTGCCGACGC CGCGCGCTCG
GTCGCGCACA AGCTCGTGAT GCACCAGCGC CGCGCGGGCG GTCAGTCACA GCATTCGGAA
ATGCTCGATC TCGCGCCGAA ATCCGACCGG ATCCAGAACG CGCTGAACTA TGCGCGCCAG
CATCTCGGCC GCGCGCTGAC CGTCGAGGAA CTGGCCGACG CCGCGCACCT GAGTCCGCGT
CAGTTCAGCC GCGTGTTCAC GCTCGAAACC GGGCAGTCGC CGGCGAAGGC GATCGAGCGG
CTGCGGCTCG AGGCCGCGCG GCTGATGATC GAGCAGAGCC GGCATTCGCT CGACGTAATC
GCGAAGGAGA ACGGTTTCCG CGACCGGCGC CACCTGCGCG ATGCGTTCGT GCGCGGCTTC
GGCGTGCCGC CGCAGGCGGT GCGGCGCGAC GCGCGGGCGG ACGAGCGCGA AACGGCCTGA
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| Protein sequence | MHRIGFLISD GFQIMALAAQ SVFEYANMGD GEPFYVLDNY SVDGGDVRSS LGLPVATRAL
SGRLDVDTWI VAGVNDPVAS PAPAGVVAFL RRPNARARRI AGICTGAFVL AEAGLLAQRR
ATTHWAYGRD MQKHFPEVRV EEDRIYIVDG PIWTSAGMTA GLDLALAMVE KDLGADAARS
VAHKLVMHQR RAGGQSQHSE MLDLAPKSDR IQNALNYARQ HLGRALTVEE LADAAHLSPR
QFSRVFTLET GQSPAKAIER LRLEAARLMI EQSRHSLDVI AKENGFRDRR HLRDAFVRGF
GVPPQAVRRD ARADERETA
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