Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4197 |
Symbol | |
ID | 6179561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1249854 |
End bp | 1250873 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641683966 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001810877 |
Protein GI | 172063226 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.216632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.10176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTCG ATGATCCACT CACTCCCCTC AACACATGGC TCGAAGCCAC GGAACGCAAC ATGGCCAAAG CATTCGCATC GCAAGCCGAT CTGGAAGTGA AGAAGATCAC CTGGACGCAG CTGTCCGAGA ACGCATATGC CTATACCGCC GAAGGCGACC CGAACTCGGG CGTAATCATC GGCGACGACA GCGTGCTGGT CGTCGATACG ACCGCGACGC CCGCGATGGC GCAAGACCTG ATCGCGAAGA TCCGCAGCGT GACCGACAAG CCGATCAAGC ACGTCGTGCT GTCGCATTAC CACGCGGTGC GCGTGCTCGG CGCGTCCGCG TATTTCGCCG AAGGCGCGCA GCACGTGATC GCGAGCCGCG GCACCTATGA AATGATCGTC GAGCGCGGCG AGGCCGACAT GAAGTCGGAG ATCGAGCGCT TCCCGCGCCT GTTCGCGGGC GTCGAGACGG TGCCGGGCCT GACCTGGCCG ACGCTCGTGT TCGAGCGCGA GATCACGCTG TTCCTCGGCA AGCTCGAAGT GAAGATCATG CACGTCGGCT CGGGCCATAC GAAGGGCGAC ACGATCGTCT GGCTGCCGTC GCAGAAGGTG CTGTTCTCCG GCGACCTGGT CGAATACGAC GCGGCCTGCT ATTGCGGCGA CGCGCAGCTC GAACAATGGC CGACCACGCT CGAGGCGCTG CGCGCGCTCG GCGCGGAAAA GCTCGTGCCG GGCCGCGGTC CCGCGCTGCT GAATCCGGCC GACGTGAACA AGGGTCTCGA CTATACGAAG GACTTCGTGA CGACGCTGCT CGCGCAGGGC CGCAAGGCCG TCGAGCGCAA GCTCGACCTG AAGGCGTCGA TGGCGCTCAC GCGCGAGGCG ATGGATCCGA AGTTCGGCAA CGTGTTCATC TACGAGCACT GTCTGCCGTT CGACGTGTCG CGCGCATTCG ACGAGGCGAG CGGCATCACG CATCCGCGCA TCTGGACCGC GCAGCGCGAC AAGGAAATGT GGGACGCGCT GCAGGACTGA
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Protein sequence | MQVDDPLTPL NTWLEATERN MAKAFASQAD LEVKKITWTQ LSENAYAYTA EGDPNSGVII GDDSVLVVDT TATPAMAQDL IAKIRSVTDK PIKHVVLSHY HAVRVLGASA YFAEGAQHVI ASRGTYEMIV ERGEADMKSE IERFPRLFAG VETVPGLTWP TLVFEREITL FLGKLEVKIM HVGSGHTKGD TIVWLPSQKV LFSGDLVEYD AACYCGDAQL EQWPTTLEAL RALGAEKLVP GRGPALLNPA DVNKGLDYTK DFVTTLLAQG RKAVERKLDL KASMALTREA MDPKFGNVFI YEHCLPFDVS RAFDEASGIT HPRIWTAQRD KEMWDALQD
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