| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4186 |
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| Symbol | |
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| ID | 6179459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1233734 |
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| End bp | 1234429 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683955 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_001810866 |
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| Protein GI | 172063215 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.24384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.790942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTGC TGATCGTCGA AGACGAACCG AAAGTCGTCG AATACCTGAA GAGCGGCCTG
ACCGAGGAAG GCTGGGTCGT CGATACCGCG CTCGACGGCG AGGACGGCGC GTGGAAGGCC
ATCGAATTCG ACTACGACGT GGTCGTGCTC GACGTGATGC TGCCGAAACT CGACGGCTTC
GGCGTGCTGC GCGCGTTGCG CGCGCAGAAG CAGACGCCCG TGATCATGCT GACCGCGCGC
GACCGCGTCG ACGACCGCGT GCGCGGGCTG CGCGGCGGCG CCGACGACTA CCTGACCAAG
CCCTTCTCGT TCCTCGAGCT GATCGAGCGG CTGCGCGCGC TCACGCGCCG CGCGCGCGTG
CAGGAATCGA CGCTGATCTC GATCGGCGAC CTGCGCGTCG ACCTGATCGG TCGCCGCGCG
ACCCGCGACG GCACGCGCCT CGACCTCACC GCGCAGGAAT TCCAGTTGCT CGGCGTGCTC
GCGCGGCGCA GCGGCGAGGT GCTGTCGAAA ACGACGATCG CCGAGCTCGT ATGGGACGTG
AACTTCGACA GCAACGCGAA CGTCGTCGAG ACGGCGATCA AGCGCCTGCG CGCGAAGCTC
GACGGTCCGT TCGCGGAGAA ACTGCTGCAC ACGATCCGCG GCATGGGCTA TGTGCTCGAG
GCGCGCGAGG AAGGCGACGC GGAGCGGCAC GCATGA
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| Protein sequence | MKVLIVEDEP KVVEYLKSGL TEEGWVVDTA LDGEDGAWKA IEFDYDVVVL DVMLPKLDGF
GVLRALRAQK QTPVIMLTAR DRVDDRVRGL RGGADDYLTK PFSFLELIER LRALTRRARV
QESTLISIGD LRVDLIGRRA TRDGTRLDLT AQEFQLLGVL ARRSGEVLSK TTIAELVWDV
NFDSNANVVE TAIKRLRAKL DGPFAEKLLH TIRGMGYVLE AREEGDAERH A
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