Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4117 |
Symbol | |
ID | 6179645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1152851 |
End bp | 1154629 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641683887 |
Product | phosphotransferase domain-containing protein |
Protein accession | YP_001810798 |
Protein GI | 172063147 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1796] DNA polymerase IV (family X) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGATCC ACAATGCCGA GTGCGCGGCC GTATTCGCCG AAATCGCCGA CATGCTCGAG ATTCAGGGCG CGAATCCGTT CCGGGTGCGC GCCTATCGCA ACGCGGCCCG TACGATTGCC GAGTACGGCC GCGACATTCC GGCGATGATC GCGAACGGCA GCGATCTCAG TCAGATTCCA TCGATCGGCG CCGATCTCGC GGCGAAGCTG CGCGAGATCG CCGCGACCGG CACCTGCGAA CTGCAGCAAA CGCTGCGCCA TGCGTTGCCG GGCGCGATCG TCGAATTGCT CGACGTGCCG GGGCTCGGCG CGAAACGCGT GAAGGCGCTG CATGACGCAT TGCACGTCGA CTCGCTCGAA CAGTTGCGCG CCGAAGCGAA GAGCGGGCAC GTGCGCGCGC TGCCGGGCTT CGGCGCGAAG ACCGAAGCGC ATCTGCTCGA CGCGATCGAC GAGCGTCTGC AGCGCGAGCC GCAGCGCTTC CTGCTGCCCG ATGCCGCGCA ATCGCTGCGG CCGATGCTCG AGCGGCTGCG CCAGGTGGCC GGCGTCGGCG AGGCGGTGCC GGCCGGCAGT TTTCGGCGCT GCCGCGAGAC GGTCGGCGAT CTCGACATCC TCGTGAGTGC ACAAGATGCG GCCGCGGTGG CCGACGCGTT CGTCAGCTGC GGCGACGTCG TGCGCGTGCT CGCGAACGGC AAGACGCGTT CGAGCGTGAT GTTCGGCAAC GGGCTGCAGG TCGACCTGCG CGTCGTCGAC GCCGACGCAT TCGGCGCGGC GCTAGTCTAT TTCACCGGAT CGAAGGCGCA CAACATCGCG CTGCGCCGGA TCGCGCAGGC CGGCGGCCTG AAGATCAACG AATACGGCGT GTTCCGTGGC GACGAGCGGA TCGCGGGCGC GACGGAGGCT TCCGTCTACG AGGCGATCGG CCTTCGCTGG GTGCCGCCCG AACTGCGCGA GGGCCGCGGC GAGATCGACG CGTCGCGCAC CGGCACGCTG CCCGCGCTGG TCGAGCGCAA GCATCTTCAT GGCGATCTGC ACGCGCATAC CGACGCGTCG GCCGGGCGCG ACAGCCTGCG AGCGATGGCG GATGCCGCCC GCGCGCGCGG GCTCGCGTAT CTGGCCATCA CCGACCGCAT GCCGGATGCC GGCGGCGGCC GTACCGATTG CGACTGGCTC GTGCGACAGA TCGACGAGAT CGACCGCCTC AACGCGTCGT TCGACGATTT CGTGCTGTTG AAGGGCGTGG AGGCCGGCAT TCGCGAGGAC GGCAGCCTCG ATGTGCCCGA CGACGCGCTC GGCCGGCTCG ACCTCGTCGT CGGCGCGGTG CGCGACGGCT TCGACCTGCC GGGCGACAGG CAGACCGAGC GGATCCTGCG CGCGATCGAT CATCCGTATT TCACGATCCT CGCGCATCCG ACGGGCCGGC TGCTCGGCGA ACGCGACGCC TGCGAACTCG ACGTGCCGCG CGTGCTCGCC GCGGCCGCCG CGCGCCGCTG CTTCGTCGAA CTCGACGGCG ACCCGCGGCG GCTCGATCTG CCGGACCTGT GGTGCCGCGA GGCCGCGAAG GCCGGCGTCG CGGTGGCGAT CGGCTCGGAC GCCCGCCGCG CGGACGATCT CGACAACCTC GACTACGGTA TCGGCCACGC GCGGCGCGGC TGGCTCACGC GGCACGACGT GCTCAACACG CGCACGCTCG CGCAACTGCG GCCGCTGCTG GCGCGCACGA TGGGTGGCGC GGGCAGCGCG AGCGGCGCGT CGAAGCGCGA CCGCCCGAAG GGCGCGTGA
|
Protein sequence | MPIHNAECAA VFAEIADMLE IQGANPFRVR AYRNAARTIA EYGRDIPAMI ANGSDLSQIP SIGADLAAKL REIAATGTCE LQQTLRHALP GAIVELLDVP GLGAKRVKAL HDALHVDSLE QLRAEAKSGH VRALPGFGAK TEAHLLDAID ERLQREPQRF LLPDAAQSLR PMLERLRQVA GVGEAVPAGS FRRCRETVGD LDILVSAQDA AAVADAFVSC GDVVRVLANG KTRSSVMFGN GLQVDLRVVD ADAFGAALVY FTGSKAHNIA LRRIAQAGGL KINEYGVFRG DERIAGATEA SVYEAIGLRW VPPELREGRG EIDASRTGTL PALVERKHLH GDLHAHTDAS AGRDSLRAMA DAARARGLAY LAITDRMPDA GGGRTDCDWL VRQIDEIDRL NASFDDFVLL KGVEAGIRED GSLDVPDDAL GRLDLVVGAV RDGFDLPGDR QTERILRAID HPYFTILAHP TGRLLGERDA CELDVPRVLA AAAARRCFVE LDGDPRRLDL PDLWCREAAK AGVAVAIGSD ARRADDLDNL DYGIGHARRG WLTRHDVLNT RTLAQLRPLL ARTMGGAGSA SGASKRDRPK GA
|
| |