| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4112 |
|---|
| Symbol | |
|---|
| ID | 6181182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1147766 |
|---|
| End bp | 1148548 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641683882 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_001810793 |
|---|
| Protein GI | 172063142 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.21872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTCACC AGGCCAATGA CGCCGTCGCC CCCGCGAGTG GCATGATCGA GCTTTCCCAC
AGCTTCGACG CGAACCGGTT TCTCGCCGCC GTCGACCGCG ACGAGCGCGC GACGCTGATT
GCCAACCTTC AGCTCGTGCA CCTGAAATCG GGCCAGGTGC TGTGCGAACC CGGCGAAATG
CTCACTGCCG TCTACCTGCC TGTCACGACG GCGATTTCAC TGCAGTACGT GTCGACCGGC
GGCATGACGC TGGAAGTTGC GCAGATCGGC AGCGAGAGCG TCGTGTGCGA CGACGTGATC
GGCGGCAGCG GCCGGATGCC GTGCCGCGCT GTCGCATGCC GCGACGGCTT CGTCTACCGG
CTCGACCGGC GCATCTTCGC CGCCGCGTTC GATGCGTCGC CGGTGATTCG CCATCTCGTG
TTCGTCTGCG TGCGGCTGCT GATGGCCCAG GTCGCTCAGA TCACGTTCTG CAGCCGCCAT
CACGTCCTCA AACATCAGTT ATGCAGATGG TTCCTGCTCG CGTACGACCG GTCGCGCAGC
ATCGAGATCC AGGTCACCCA CAGCATGCTC GCGCAGATGC TCGGCGTCCG ACGCGAGACG
GTCACGGACG CAGCCGGCGA GATCCAGCGG CTCGGCCTGA TCCGCCAGTA CCGCAGCTCG
ATCGTGCTCG CCGATCTGGC CGGCCTCGAG AAACTGTCGT GCGGCTGCCG CGCGATCGTG
CGCGACGAGA TGAAGCGCAT CCTGTCGGCC GACTCTGGCG TGAGCGCCGC GGCGCGCGCG
TGA
|
|---|
| Protein sequence | MTHQANDAVA PASGMIELSH SFDANRFLAA VDRDERATLI ANLQLVHLKS GQVLCEPGEM
LTAVYLPVTT AISLQYVSTG GMTLEVAQIG SESVVCDDVI GGSGRMPCRA VACRDGFVYR
LDRRIFAAAF DASPVIRHLV FVCVRLLMAQ VAQITFCSRH HVLKHQLCRW FLLAYDRSRS
IEIQVTHSML AQMLGVRRET VTDAAGEIQR LGLIRQYRSS IVLADLAGLE KLSCGCRAIV
RDEMKRILSA DSGVSAAARA
|
|---|
| |