Gene BamMC406_4083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4083 
Symbol 
ID6180148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1110227 
End bp1111414 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID641683853 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_001810764 
Protein GI172063113 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA GACTGACGCC GGTCTACCTG TCCGCGCCCG GCATGATCAA CGCGCTCGGC 
GCAACCACCG ACGAAATCGT CGACGCATTG CACGCCGGCG TCGCGCCGGG CATGGCGCCG
CGTACCGATG GCGTTGCCGG CGGCTGGATC GGGAGCGTGC GTGCCGCGCT CGACGTCGCG
CCGCCCACCT CGCTCGCGCA TTTCGATTGC AGGAACAACC GGCTGTTGCT TGCCGCGCTG
GCGCAGATCG GACCCTTCGT CGACGCGGCG ATCGCGCGTT ACGGTCCGCG CCGGATCGGT
GTCGTGATCG GCACGAGCAC GTCTGGTATC CAGGCGGCGG AGCACGCGCT TGCGCAGCGT
GCCGCGACGG GCACGATGCC TGCCGCGTTC GATTATCGAC AGATGGAAAT CGGCACGGCG
GCGCCGTTCG TGCGCGCGGT GCTCGGTGTG GCCGGGCCAG CCTATACGTT GTCGACTGCA
TGCACGTCGA GTGCCAAGGC ATTCGCGGCC GCACGCCGCC TGCTGCGGCT GAAGCTGTGC
GACGCGGTCG TCGTCGGCGG CGCGGATTCG CTGTGCGAGC TGACGCTGCA GGGCTTCGCG
TCGCTCGAAT CGGTCAGCCG GGGGCGGACC AACCCGATGA GCCGAAACCG GAACGGCATC
AATATCGGCG AAGGCGCCGC GCTGTTCGTG ATGAGCCGCG ACGAAGCGGC GGTCCGGCTG
GCCGGCGTCG GCGAGTCGAG CGATGCGCAC CACATCTCGG CGCCGGATCC GGCGGGCTGC
GGCGCGGAGG ATGCGCTGTG CGCCGCGCTC GCGGACGCCG GCGTTGCGTC GTCCGCTATC
GGCTACGTGA ACCTGCATGC GACGGCGACG CGGCTGAACG ACGAGATGGA AGCGAACGTG
ATGGCGCGGG TGTTTCCGCA CGGCGTACCG GCGAGCGGGA CCAAGCCGCT GACAGGACAC
ATGCTCGGCG CGGCGGGCGC GACCGAGCTT GGATTCGGCT GGCTGACGCT GGCGCGCGGG
ATCGCGCTGC CGACGCACGT CTGGGACGGC GAGCACGACC CGGCGCTGCC GGGGCTCGAC
CTGGTCGACC GCGAGCATCG TCTGGCCGGC GCTGCAACAG GACGCTACGT GATGAGCAAT
TCGTTCGCAT TCGGCGGCAG CAATGCCAGC CTGATTCTGG GAGGCTGA
 
Protein sequence
MNARLTPVYL SAPGMINALG ATTDEIVDAL HAGVAPGMAP RTDGVAGGWI GSVRAALDVA 
PPTSLAHFDC RNNRLLLAAL AQIGPFVDAA IARYGPRRIG VVIGTSTSGI QAAEHALAQR
AATGTMPAAF DYRQMEIGTA APFVRAVLGV AGPAYTLSTA CTSSAKAFAA ARRLLRLKLC
DAVVVGGADS LCELTLQGFA SLESVSRGRT NPMSRNRNGI NIGEGAALFV MSRDEAAVRL
AGVGESSDAH HISAPDPAGC GAEDALCAAL ADAGVASSAI GYVNLHATAT RLNDEMEANV
MARVFPHGVP ASGTKPLTGH MLGAAGATEL GFGWLTLARG IALPTHVWDG EHDPALPGLD
LVDREHRLAG AATGRYVMSN SFAFGGSNAS LILGG