Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4081 |
Symbol | |
ID | 6181197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1107145 |
End bp | 1107822 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641683851 |
Product | putative signal peptide protein |
Protein accession | YP_001810762 |
Protein GI | 172063111 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.49377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCTGA CGCTGCGCTA CCGGCGGTTT GCGGCGACGC TGCTCGGCGC ATGCATGATG CTCGCCGGCG GCGAGCTGGC GGCCGCGCCG GCGCCGGACG CGGCGGCAGC GATGGCCCGC CCGGCAAACG CCGCGCTCGT TGCCGATGTC GCGACGCGGC TGGCAAGAGT CGGTGCGATT CGCGCGGATT TTCGGCAGAC ACAGACGCTG TCGGCGATGA AGCAGCCGCT CGTCAGCACG GGATCGATGT TGTTCGATCG CAGGTCGGGT GTCGTCTGGC GCATCGACAC ACCCTACAAG GCCACTTATG TGATTACCGA CGGCGGCATG CGTGAGGTCG GGGCGGACGG ACGCCTCGTC GCGCCGGCCG GCGGTGGTCG TGGCGTCGCG CAGGTGTCGC GCATGATGCG CGACATGCTC GGCGGCGACC TGTCGGCGCT GTATGCGCAG TTCGACGTCG AAGCGAGCGG CACGCCGGAA CGGTGGCGGA TGGTGTTGCG GCCGAACCAG CCGCAGCTCG CACAGGCGAT CCGCGTGCTC GAAATGAGCG GCGGTGCCTA TCTCGGCAAG CTCGACATGA CGTTTGCGAA CGGCAACGTG ACCGTGCTCG AGTTCGTGCG GCCGACGCCG GTCGACGCGC CCGCGCCCAT CGAGCGCGGT TGGCTGGAGG CACGATGA
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Protein sequence | MGLTLRYRRF AATLLGACMM LAGGELAAAP APDAAAAMAR PANAALVADV ATRLARVGAI RADFRQTQTL SAMKQPLVST GSMLFDRRSG VVWRIDTPYK ATYVITDGGM REVGADGRLV APAGGGRGVA QVSRMMRDML GGDLSALYAQ FDVEASGTPE RWRMVLRPNQ PQLAQAIRVL EMSGGAYLGK LDMTFANGNV TVLEFVRPTP VDAPAPIERG WLEAR
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