Gene BamMC406_4081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4081 
Symbol 
ID6181197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1107145 
End bp1107822 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID641683851 
Productputative signal peptide protein 
Protein accessionYP_001810762 
Protein GI172063111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.49377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTGA CGCTGCGCTA CCGGCGGTTT GCGGCGACGC TGCTCGGCGC ATGCATGATG 
CTCGCCGGCG GCGAGCTGGC GGCCGCGCCG GCGCCGGACG CGGCGGCAGC GATGGCCCGC
CCGGCAAACG CCGCGCTCGT TGCCGATGTC GCGACGCGGC TGGCAAGAGT CGGTGCGATT
CGCGCGGATT TTCGGCAGAC ACAGACGCTG TCGGCGATGA AGCAGCCGCT CGTCAGCACG
GGATCGATGT TGTTCGATCG CAGGTCGGGT GTCGTCTGGC GCATCGACAC ACCCTACAAG
GCCACTTATG TGATTACCGA CGGCGGCATG CGTGAGGTCG GGGCGGACGG ACGCCTCGTC
GCGCCGGCCG GCGGTGGTCG TGGCGTCGCG CAGGTGTCGC GCATGATGCG CGACATGCTC
GGCGGCGACC TGTCGGCGCT GTATGCGCAG TTCGACGTCG AAGCGAGCGG CACGCCGGAA
CGGTGGCGGA TGGTGTTGCG GCCGAACCAG CCGCAGCTCG CACAGGCGAT CCGCGTGCTC
GAAATGAGCG GCGGTGCCTA TCTCGGCAAG CTCGACATGA CGTTTGCGAA CGGCAACGTG
ACCGTGCTCG AGTTCGTGCG GCCGACGCCG GTCGACGCGC CCGCGCCCAT CGAGCGCGGT
TGGCTGGAGG CACGATGA
 
Protein sequence
MGLTLRYRRF AATLLGACMM LAGGELAAAP APDAAAAMAR PANAALVADV ATRLARVGAI 
RADFRQTQTL SAMKQPLVST GSMLFDRRSG VVWRIDTPYK ATYVITDGGM REVGADGRLV
APAGGGRGVA QVSRMMRDML GGDLSALYAQ FDVEASGTPE RWRMVLRPNQ PQLAQAIRVL
EMSGGAYLGK LDMTFANGNV TVLEFVRPTP VDAPAPIERG WLEAR