| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3989 |
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| Symbol | |
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| ID | 6179552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 992164 |
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| End bp | 993330 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683759 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001810670 |
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| Protein GI | 172063019 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.143637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG CCTTTCTTCC CGCCCGTCTC GCCTTCTCCG CGGCCGCGCT GATCGCGGCC
GTTCCCGCCT TCGCGCAATC CGCGCCGCAG ACGATCCTGA TCGGCCTCGC CGCGCCGCTG
ACCGGCCCGT CCGCACGCAT CGGCAAGGAC TTGCAGAACG GCGCGCAGCT CGCGATCGAC
GACGCGAACG CGAAGCATCC GAGCATCGGC GGCAAGCCGG TCGTCTACAA GCTGGTCGCG
GCCGACGACC AATCCGACCC GCGCACGGCC GTCGCGGTCG CGCAGCAACT GGTCGACCAG
CACGTGATCG GCGTCGTCGG TCACTGGAAC ACGGGCTGCA GCGTGCCGGC GTCACGCGTC
TATCGCGATG CGGGCATTGC GCAGATCGCG CCGGCCTCCA CCGGCCACCA GTACACGCAG
CAGGGCTACG CAACCGCCTT CCGCATCATG GGTCACGACG ATGCGGGCGG CAACTTCACC
GGCGCCTATG CGGTGAAGAC CCTGAAGGCG AAGCGCATCG CGGTGATCGA CGATCGCACG
TCGTTCGGCG CGGGGCTGGC CGACCAGTTC ATCAAGGGCG TGCAGGCGAA CGGCGGCACG
ATCGTCGATC GCCAGTACGT GAACGACAAG ACGACCGACT TCAGCGGCGT GCTGACCGCG
ATCAAGGGCA AGCGCGCGGA TCTCGTGTTC TTCGGCGGGC TCGACGCGCA GGCCGCGCCG
ATCGCGCGCC GGATGCGCCA GCTCGGCGTG AGCGCGCCGC TGCTCGGCGC CGGCGGTTTC
GTGAGCCAGA CCTTCCTGTC GCTCGCGGGC AAGGACGGCG AAGGCGTGAC GGCACTCGAG
CCGGGCCTGC CGCTCGACCG GATGCCGGGC GGCAACGCGT TCGACGCGCA ATATCGCGCA
CGCTGGCACG CGCCGATCGA GCTGCACGCG CCGTTCGCGT ACGACGCGGC CGCCACGCTG
ATCGCGGCCG TCCAGAAGGC CGGCACGACG CAGCCTGCGA AAGTGGTCGC GGCCGTGCGC
GCGATCGACC GGCCCGGCGT GACCGGCCGG GTCGCGTTCG ATCAGCAAGG CAACCTGAAG
GACCCGGCGT TCACGATCTA CCAGGTACGC GGCGGCAAGT GGACCGTCGT CGACGTGCTC
GGCGGCGCGC GCCCCGCAAC GAAATAA
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| Protein sequence | MKIAFLPARL AFSAAALIAA VPAFAQSAPQ TILIGLAAPL TGPSARIGKD LQNGAQLAID
DANAKHPSIG GKPVVYKLVA ADDQSDPRTA VAVAQQLVDQ HVIGVVGHWN TGCSVPASRV
YRDAGIAQIA PASTGHQYTQ QGYATAFRIM GHDDAGGNFT GAYAVKTLKA KRIAVIDDRT
SFGAGLADQF IKGVQANGGT IVDRQYVNDK TTDFSGVLTA IKGKRADLVF FGGLDAQAAP
IARRMRQLGV SAPLLGAGGF VSQTFLSLAG KDGEGVTALE PGLPLDRMPG GNAFDAQYRA
RWHAPIELHA PFAYDAAATL IAAVQKAGTT QPAKVVAAVR AIDRPGVTGR VAFDQQGNLK
DPAFTIYQVR GGKWTVVDVL GGARPATK
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