Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3919 |
Symbol | |
ID | 6180185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 920043 |
End bp | 921200 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641683690 |
Product | alcohol dehydrogenase |
Protein accession | YP_001810601 |
Protein GI | 172062950 |
COG category | [C] Energy production and conversion |
COG ID | [COG1454] Alcohol dehydrogenase, class IV |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0768529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.635531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGT TTCAATTCCG TACCGTTCCG ACGCAGATCG TGGAATTCGG CGCCGCGCGC CGGCTCGGCG CGGTGTTGCG CGAACGCTTT CCGGCGCTCG CGCGGCTGTG CGTCGTCACC GACGCGTTCC TGCATCGCAG CGGCGTGCTC GCGCCCGCGC TGGCGAGCCT CGCCGCGCAC GGCTGGCAAG TGACGGTGAT CGACGACGTG ATCGCCGATC CGCCCGAGCA TGTAGTGCTC GAAGCGACCG CGCGGGCGGC GGCGGCCGAC GCCGAGATCG TGCTCGGCCT CGGCGGCGGT TCGTCGATGG ACGTCGCGAA ACTGATCGCC GCGCTCGCGC CGGGGCGGCA GGCGCTGGCC GACATGTACG GCGTCGACAA GGTGGCAACG TCGCGGCTGC CGCTCGTGCA GATGCCGACC ACGGCCGGCA CCGGCTCCGA AGTGACGGCC GTGTCGATCG TCACGGTCGG CGAGGCGCGC AAGATGGGCG TCGTGTCGCC GCACCTGTTC GCGGACGTCG CGATCCTCGA CGCCGAGCTG ACGCTCGGGC TGCCGCGCGC GGCAACGGCG GCGACGGGCA TCGACGCGAT GGTGCATGCG ATCGAGGCCT ATACGTCGTC GCGGCTGAAG AATCCGGTGT CCGACATGCT GGCCGTGCAG GCCTTGACGC TGCTGTCGCG CAACCTGCTG AAGGCGTGCG ACGACGGCCT CGATCGCCAC GCGCGCGAGG CGATGCTGGT CGGCGCGATG TTCGCCGGCC AGGCATTCGC GAACGCGCCG GTCGCGGCCG TGCATGCGCT TGCCTATCCG GTCGGCGGCA TTTTCCATGT GCCGCACGGG TTGTCGAACG CGCTCGTGCT GCCGCATGTG CTGCGCTTCA ACGCACCGGC CGCCGCGCCG CTATATGCGG AGCTCGCGGC GATCGTCGCG CCGTCGGCGA CGGGCAGCGA CGAAGCGAGG ACGCAGGCGC TGATCGACGA GGTCGATCGG TTGATCATCG CGACGGGCAT CCCGCGCACG CTGCGCGAGG TCGGCATCGG CGAAGGCGAC CTGCCGCGCA TGGCGTCGGA TGCGATGCTG CAGACGCGCC TGCTCGTGAA CAATCCGCGT GAAGTGACGG AAGCCGACGC GCTGGCGATC TATCGGCACG CGTGGTGA
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Protein sequence | MNPFQFRTVP TQIVEFGAAR RLGAVLRERF PALARLCVVT DAFLHRSGVL APALASLAAH GWQVTVIDDV IADPPEHVVL EATARAAAAD AEIVLGLGGG SSMDVAKLIA ALAPGRQALA DMYGVDKVAT SRLPLVQMPT TAGTGSEVTA VSIVTVGEAR KMGVVSPHLF ADVAILDAEL TLGLPRAATA ATGIDAMVHA IEAYTSSRLK NPVSDMLAVQ ALTLLSRNLL KACDDGLDRH AREAMLVGAM FAGQAFANAP VAAVHALAYP VGGIFHVPHG LSNALVLPHV LRFNAPAAAP LYAELAAIVA PSATGSDEAR TQALIDEVDR LIIATGIPRT LREVGIGEGD LPRMASDAML QTRLLVNNPR EVTEADALAI YRHAW
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