Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3916 |
Symbol | |
ID | 6179799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 917701 |
End bp | 918672 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641683687 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001810598 |
Protein GI | 172062947 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.993386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.61928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGACA TCGACCTGAA CCTCGTCACC GCGCTCGACG TGCTGCTGAC CGAAGGGAGC GTGACCGGGG CCGCGCGCCG GCTCGGACTG AGCACGTCCG CGATGAGCCG CACGCTCACG CGGCTGCGCA CCGCGACCGG CGATCCACTG CTCGTGCGCG CCGGACGCAA GCTCGTGCCG ACGCCGCACG CGGCGGCGCT GCGCGATCGC GTGCATGCCG TCGCGGTCGA TGCGCGTGCC GTGCTTCGGC CGGCCACGGC CGATATCGAC ATGACGACGC TGTCGTCCAC GTTCACCATC CGCGCGGCCG CATCGTTCAT GGACATGCTC GCCGGCCCGG TGGTCGCCGC GATCGGCGAC ATCGCCCCCG GCGTGCGCGT GCGTTTCGTC CCCAAGCCCG ACCGCGATCC GGGGCCGCTG CGCGACGGCA CGGTCGACCT GGAAATCGGC AAGCGCGGCG ACGACGCGCC CGAACTGCAC ACGCGCGAGC TCTTTCACGA CGGGCACGTC GCGGTGGCGC GCGCCGGGCA TCCGCTGTTC GCGGCGGCCA GAATCACGCC CGCTCGCTAC GCGGCCTGCC GTCATGTGAT CGCAGCGCAG CTCGGCGACT TCGGCGGCCC GATGAACGAT GCGGTAGACA CGCCCGCACC CGCCCCCCAT ACCGTGCAGG TCGTGGTGCC CAGCTATCCC GATGCGATGC GCGTCGCGGC CGGCACCGAC CTGATTGCGC TCGTGCCGCG CTCGAGCCTC GGCAACGCAT TCACGCCGGG GTTCGTGGAC GCGCTCGGGC TGCGCAGCTT CGCGATACCG GTGCGGTTGC CCGAGATCCT GATCTCGGCG CTATGGCATC CGCGCATGCA CGGCGACCCC GTCCATCGCC GTCTGCGCGA TGCCGTCATC GACGTGTGCA GGCGCGCGTA TCCGGCGGCC CGCGCACCGG CGCGCGGCAC GACACCGCGC GGCGCCGGCT GA
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Protein sequence | MEDIDLNLVT ALDVLLTEGS VTGAARRLGL STSAMSRTLT RLRTATGDPL LVRAGRKLVP TPHAAALRDR VHAVAVDARA VLRPATADID MTTLSSTFTI RAAASFMDML AGPVVAAIGD IAPGVRVRFV PKPDRDPGPL RDGTVDLEIG KRGDDAPELH TRELFHDGHV AVARAGHPLF AAARITPARY AACRHVIAAQ LGDFGGPMND AVDTPAPAPH TVQVVVPSYP DAMRVAAGTD LIALVPRSSL GNAFTPGFVD ALGLRSFAIP VRLPEILISA LWHPRMHGDP VHRRLRDAVI DVCRRAYPAA RAPARGTTPR GAG
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