Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3915 |
Symbol | |
ID | 6180831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 916117 |
End bp | 917505 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683686 |
Product | xanthine permease |
Protein accession | YP_001810597 |
Protein GI | 172062946 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease [TIGR03173] xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.53056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCCG CTTCCCCCGC CCGATCCGCC GCCCACGGCG CCGCCGACGC CGATCCGTCG CACGACCTCG TCTATGGCCC CAATGACCGG CCCGCGCCGA TGGTCGCCTT TGTCGCCGCG CTGCAGCACC TGCTGGCGAT CATCGTGCCG ATCGTCACGC CCGGCCTGTT GATCTGCCAG GCGCTCGGCG TATCGAGCCG GGATACCACG CTCATCGTGT CGATGTCGCT CGTGATTTCC GGCATCGCCA CCTTCGTGCA GTGCAAGCGC TTCGGCCCGC TCGGCGCCGG CCTGCTGATC GTGCAGGGCA CCAGCTTCAA CTTCGTCGGC CCGCTGATCG CCGGCGGCAG CGTGATGGTC AAGCAGGGCA CGCCGGTCGA GACCGTGATG GCCGCGATCT TCGGCGTCGT GATCGCCGGT TCGTTCGTCG AGATGGCCGT GTCGCGCATC CTGCCGTTCG TGAAGCGCCT GATCACGCCG CTCGTCACCG GCATCGTCGT GCTGCTGATC GGCCTCACGC TGATCAAGGT CGGTCTCATC AGCATGGGCG GCGGTTACGG CGCGATGGCC AACGGCACGT TCGCGAGCGC GCAGAACCTG ACGCTGTCGT GCGTCGTCCT CGGCACGATC ATCCTGCTGA ACCGCGTGCC GATCGTGTGG GTGCGCAGCA CCGCGCTCGT AATCGCCCTC GTGATCGGCT ACGCCGCGGC CGCCGTGCTC GGCCGCCTCG ACTTCACCGG CGTGCATCAG GCCGCGCTGT TCCAGGTCCC GACGCCGCTG CACTTCGGCA TCGGCTTCTC GTGGTCGCTG TTCGTGCCGA TGCTGATCAT CTACCTCGTC ACGTCGCTCG AAGCGATCGG CGACGTCACC GCCACCAGCA AGATCTCGAA GGAGCCGGTC GAAGGGCCGG TGTGGATGCG GCGGATCAAG GGCGGCGTGC TCGTGAACGG CGCGAACTCG CTGCTGGCCG GCGTGTTCAA CACGTTCCCG AGCTCCGTGT TCGCGCAGAA CAACGGCGTG ATCCAGATCA CCGGCGTCGC GAGCCGCCAC GTCGGCATCT GGATCGCCGG CATGCTCGTG GTGCTCGGCC TGTTCCCGGT CGTCGCGGGC GCGCTGCAGG CCGTGCCGGA GCCCGTGCTC GGCGGTGCGG CGATGGTGAT GTTCGGCGCG GTGGCCGCGT CGGGCATCAA CATCCTGTCC GGCATCCACC TCGATCGCCG CGCGCTGCTG ATCATCGCGG TGTCGCTCGC GCTCGGCCTC GGCGTGTCGC AGGTGCCGGA CATTCTGAAC AGCCTACCGC ATGCACTGAA GAACGTGCTG GAATCGGGCG TCGCCACCGG CGGCATCTGT GCGCTCGTGA TGAACTGGTT CCTGCCGGAA CAGAAGTAA
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Protein sequence | MQPASPARSA AHGAADADPS HDLVYGPNDR PAPMVAFVAA LQHLLAIIVP IVTPGLLICQ ALGVSSRDTT LIVSMSLVIS GIATFVQCKR FGPLGAGLLI VQGTSFNFVG PLIAGGSVMV KQGTPVETVM AAIFGVVIAG SFVEMAVSRI LPFVKRLITP LVTGIVVLLI GLTLIKVGLI SMGGGYGAMA NGTFASAQNL TLSCVVLGTI ILLNRVPIVW VRSTALVIAL VIGYAAAAVL GRLDFTGVHQ AALFQVPTPL HFGIGFSWSL FVPMLIIYLV TSLEAIGDVT ATSKISKEPV EGPVWMRRIK GGVLVNGANS LLAGVFNTFP SSVFAQNNGV IQITGVASRH VGIWIAGMLV VLGLFPVVAG ALQAVPEPVL GGAAMVMFGA VAASGINILS GIHLDRRALL IIAVSLALGL GVSQVPDILN SLPHALKNVL ESGVATGGIC ALVMNWFLPE QK
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