| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3907 |
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| Symbol | |
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| ID | 6180999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 910082 |
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| End bp | 910822 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641683679 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001810590 |
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| Protein GI | 172062939 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.267776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCC CATCCACCGA GCCCAAAGTC ATTCTGATCA CCGGCGCAAG CAGCGGCATT
GGCGAGGGCG CCGCCCGTTT GCTCGCCGCG CAAGGCCATC GGCTCGTGAT TGGCGCGCGC
CGCACCGACC GGCTCGTCGA ACTGACGGAG TCGCTGCAGT CGGCCGGCGG CATCGTCCGC
TACCGCGAAC TCGACGTCAC CTCATCCGAG GACGTCGCGG CCTTCGCCCG CTTTGCGCTC
GATACGTTTG GCCGCATTGA CGTGCTTGTC AACAATGCCG GCGTGATGCC CCTGTCGCCG
TTGAACGCAC TGAAGATCAC CGAGTGGAAC CGGATGATCG ACGTAAACAT CCGGGGCGTA
CTGCACGGCA TTGCGGCGGT CCTGCCGGCC ATGGAGCAGC AAGGCCAAGG CCAGATCATC
AATATCTCCT CGATCGGTGG GCTGTCCGTA ACGCCGACCG CAGCCGTCTA CTGCGCCACC
AAGTTCGCCG TACGCGCCAT TTCCGACGGG CTGCGCCAGG AGACCGACAA GGTCCGCGTA
ACCGTGATCT GCCCAGGCGT CGTGGAGTCC GAACTGGCCG ATTCGATTTC CGACGACACC
GCGCGGTCGG CCATGCAGGA GTTCCGCCGC ATTGCCATCA CACCCGACGC CATCGCCCGC
GCCATCGCCT ACGCCGTAGA GCAGCCGGCG GATGTCGACG TCAGCGAAAT AGTCGTGCGG
CCTACCGCCA GCCCGTTCTG A
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| Protein sequence | MAIPSTEPKV ILITGASSGI GEGAARLLAA QGHRLVIGAR RTDRLVELTE SLQSAGGIVR
YRELDVTSSE DVAAFARFAL DTFGRIDVLV NNAGVMPLSP LNALKITEWN RMIDVNIRGV
LHGIAAVLPA MEQQGQGQII NISSIGGLSV TPTAAVYCAT KFAVRAISDG LRQETDKVRV
TVICPGVVES ELADSISDDT ARSAMQEFRR IAITPDAIAR AIAYAVEQPA DVDVSEIVVR
PTASPF
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