Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3836 |
Symbol | |
ID | 6180444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 827600 |
End bp | 828853 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641683607 |
Product | hypothetical protein |
Protein accession | YP_001810519 |
Protein GI | 172062868 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.444137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCTGA CGATCGACGA TTTGCCGGCC GCGATCCGCA CGGCCAAAAG GGCGCTGCGC GCCGACCTGC CCGGTTATGC GGCCACGTTC CGCGAACTGG AGGGCGATAT CGCGCGGCAG GTCGACGCGA TCCACCGTAC GCACGCGCAT GGCCATGACG TGATTCCGGT GCTGCGGTTC GCGGATATCG CGAACGGCAC CGTCGCTCCG CAGGCGATCG CCGCGATCCG CACGCACGGT GCGGCGGTGA TCCGCGGCGT GTTCGACGCG GCGCAGGCGC GTGACTGGAA TGACGAGATC GGCGCGTACC TGGACGCGAA CCGCTTCGCC GAGCGGCTGG AAGCGCGTGC CGAGGATCGC TACTTCGGCA ACCTCGCGTC GGGCAAGCCG CAAATCTACG GCGTCTACTG GTCGAAGCCG CAGGTGGCCG CGCGCCAGTC GCCGGCACTC ACGCAGGCAC GCGTGTTCAT GAACCGCCTG TGGCGGCATG CGGACGGCCA GCGCACGCAC TTCGATCCCG ACCAGGTGCC GGCCTACGCG GACCGGATCC GCCGCCGGCC GCCGGGCTCC ACGTCGCTCG GGCTGTCGCC GCATGTCGAC GGCGGCTCGG TCGAACGCTG GCTCGGCGCG AATTTCCGGC AGGTCTATCG CCACGTGCTG GGCGGCCGCT GGCGCGATTA CGACCCGTTC GACGCCGCGT TTCGTCCCGA TGTGGAGGAG ATTCCGTCGC CGGCCGTATG CTCGATGTTC CGCACGTTCC AGGGCTGGAC CGCGCTGACG CCGCAGGGGC CGGGCGACGG CACGCTGCAG CTGATTCCGG TGGCGAACGC GATGGCGTAC GTCGTGCTGC GCGCGCTGCA GGACGACGTC GCCGACGACG ATCTGTGCGG CGCGCGTCCG GGCCGCGCGC TGTCGATCCT GCCCGAATGG CATGCGTTGC TGCTCGACGC GCTGGTGCCG ATTCCGCACA TGGAGGCGGG CGATGCCGTG TTCTGGCACG GCGACGTCGT GCACGCGGTC GAGGATGCGC ATCGCGGCAG CGGCGACAGC AACGTGATGT ACATCGCGGC CGCGCCCGGC TGCGCGAAGA ACGACGCGTA CCTGCAGCGC CAGCGGCTCG CGTTCCTGCG CGGCGAAAGC CCGCCGGATT TCCCGGCCGA TCATTTCGAG GTCGAATTCG ACGGACGGGG TGGCGAGGGC GACCTCACGG CGCTTGGACG CGCACAAATG GGGTTCGGGC CGGTCGCTGC GTGA
|
Protein sequence | MHLTIDDLPA AIRTAKRALR ADLPGYAATF RELEGDIARQ VDAIHRTHAH GHDVIPVLRF ADIANGTVAP QAIAAIRTHG AAVIRGVFDA AQARDWNDEI GAYLDANRFA ERLEARAEDR YFGNLASGKP QIYGVYWSKP QVAARQSPAL TQARVFMNRL WRHADGQRTH FDPDQVPAYA DRIRRRPPGS TSLGLSPHVD GGSVERWLGA NFRQVYRHVL GGRWRDYDPF DAAFRPDVEE IPSPAVCSMF RTFQGWTALT PQGPGDGTLQ LIPVANAMAY VVLRALQDDV ADDDLCGARP GRALSILPEW HALLLDALVP IPHMEAGDAV FWHGDVVHAV EDAHRGSGDS NVMYIAAAPG CAKNDAYLQR QRLAFLRGES PPDFPADHFE VEFDGRGGEG DLTALGRAQM GFGPVAA
|
| |