Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3815 |
Symbol | |
ID | 6180400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 805037 |
End bp | 805882 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641683586 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001810498 |
Protein GI | 172062847 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.723291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCA TGAAACTCGC CAGGCCGCTG TTCGCGCCGC ACATGTCGTT CGTCGAACGC GCGTGGTATG TCGCGCTGCG CGTACTCGTC GTGCTGACGC TGCTGTACCT GATCCTGCCG GTGCTCGCGA TCGTGCCGTT GTCGTTCTCG TCGAGCACGT TCCTCGTCTA TCCGATCCCC GGTTTCTCGA CGCGCTGGTA CGAGAACCTG ATCGCGTCCG ACGAGTGGCG CATGGCCGCG AAGAACAGCT TCATCGTCGC GCCGTCGGCG ACCGTCGTCG CGACCGTGCT CGGCACGCTC GCCGCGATCG GCCTCACGAA GGCGGATTTC CGCGGCAAGG GGCTGCTGAT GGCCGTGCTG CTGTCACCGA TGATCGTGCC GGTCGTCGTG GTCGGCGTCG GCATGTACCT GTTCTTCGCG CCGCTCGGGC TCGCGAATAC CTACACGGGG CTGATCGCCG CGCATGCCGC GCTCGGCGTG CCGTTCGTCG TGACGACGGT CGCCGCGACC CTGCAGGGCT TCAACCAGAA CCTGGTGCGC GCGAGCCTGT CGCTCGGCGC GAATCCCGTC ACGACGTTCT TCCGCGTGAC GCTGCCGGTG ATCGCGCCGG GCGTGATGTC GGGCGCGCTG TTCGCATTCG CGACGTCGTT CGACGAAGTC GTCGTCACGC TGTTCCTCGC GGGCGCGGAC CAGACGACGC TGCCGCGCCA GATGTTTACC GGCATTCGCG AGAACATCAG CCCGACGATC GCCGCGCTCG CGACGATCCT CATCATCTTC TCGACGAGCC TGCTGCTCGC GCTCGAATGG CTGCGCGGAC GCAACGCGCG ACGTGCGGTG TCGTAA
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Protein sequence | MSTMKLARPL FAPHMSFVER AWYVALRVLV VLTLLYLILP VLAIVPLSFS SSTFLVYPIP GFSTRWYENL IASDEWRMAA KNSFIVAPSA TVVATVLGTL AAIGLTKADF RGKGLLMAVL LSPMIVPVVV VGVGMYLFFA PLGLANTYTG LIAAHAALGV PFVVTTVAAT LQGFNQNLVR ASLSLGANPV TTFFRVTLPV IAPGVMSGAL FAFATSFDEV VVTLFLAGAD QTTLPRQMFT GIRENISPTI AALATILIIF STSLLLALEW LRGRNARRAV S
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