Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3811 |
Symbol | |
ID | 6179615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 799793 |
End bp | 801316 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641683582 |
Product | transcriptional regulator |
Protein accession | YP_001810494 |
Protein GI | 172062843 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACACCG TCATCGTCGC TGACTGGCTC TCGGGCCGGA TCGACCGCAG CTCGCCCGAA CCGATGTACC GCCAGTTGCT GCAACTGATG CAGCAGGCCA TCCTGACCGG GGAATTGGGG CCGGGCACAA AACTGCCGAG TTCGCGCACG CTCGCGGCCG ACCTGTCGAT CGCGCGCAAT ACCGTGCTGC ACGTGTACGA CCAGCTCACC GCCGAAGGCT ACGTGCTGAC CACGACCGGC AGCGGCACCT ACGTGGCCGA CACGCGGCCG GACGCCGCCG TGATCCACGC ACCGGGCGCC GCGCCACCGC CGTCAGCCGC CGACGAACCG CTGCTGCCGG ACGCGCACGG CGGCCTGTCG ATGCGTGGCC GGCAGCTGAT CGAGCACGCA GGCGTGTCGC GACGTCAATG GGGCGCGTTC ATGCCCGGCG TGCCGGACGT GTCGGAATTC CCGAGCCGCA CGTGGAGCCG CCTGCAGGCG CGCCTGTGGA AGGAAGCGAA TCCGGAGCTG CTGACCTATG CGCCGGGCGG CGGCTACCGG CCGCTGCGCC GCGCGCTCGC CGACTACCTG CGCGTCGCGC GCTCGGTCAA ATGCTCGCCG GATCAGGTGA TCATCACGAC CGGCATCCAC CAGTCGATCG ACCTCGCGGT GCGGCTGCTG TCCGACATCG GCGATCGCGC ATGGGTCGAG GAGCCGTGCT ACTGGGGCGT GCGCAGCGTG CTGCAGGCGA CCGGCCTCAC GCTCACGCCG GTGCCGGTCG ACCAGGAAGG CATCGATCCG AGCGCGGCCG ACATGCAGCA GCCGCCGCGG CTCGTGCTCG TCACGCCGTC GCACCAGTAT CCGCTCGGGA TGGTGATGAG CCTCGCGCGG CGCCGGATGC TGCTCGAATA CGCGCGCCGG CACCGCTGCT GGATCATCGA GGACGACTAC GACAGCGAAT TCCGCTACGG CAGCCGCCCG CTCGCGTCGC TGCAGGGGCT CGACGACGGC GGCCGCGTGA TCTACGTGGG CAGCCTCGGC AAGATGCTGT TCCCGGGCCT GCGGATGGGC TACATGGTCG TGCCCGAGCA TCTGGTCGAC ACGTTCCGCA CCGGGCTGTC GGAGCTGTAT CGGGAGGGCC AGCTGATGCA GCAGGCCGTG CTCGCCGAGT TCATCATGGA CGGGCACCTG ACTTCGCACG TCAGACGAAT GCGCACGCTG TACGGCGAGC GCCGGCAATT GCTGATCGAT GCGATCCACG CGCGCTTCGG CGACGCGCTG CCGGTGATGG GCGACGAAGC CGGCCTGCAT CTGGTGCTCG GCCTGCCCGA CGCATGCGAC GATCGCGCGG TCACGCAAAG CGCGTTCGAC GCGGGCGTGA TCGTACGCCC GCTGACCAGC TACTACAGCC GGCTGGACAC GGCACGCCGC GGCCTGCTGC TCGGTTATGC GTGCGTCGCG CACGAAGGCA TCGGCCCCGC GTTCGACACG CTCGCGGCAA CCATCGAACA GCACCTGCCG CGGCACTTCA CGCGCGCGGC GTGA
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Protein sequence | MDTVIVADWL SGRIDRSSPE PMYRQLLQLM QQAILTGELG PGTKLPSSRT LAADLSIARN TVLHVYDQLT AEGYVLTTTG SGTYVADTRP DAAVIHAPGA APPPSAADEP LLPDAHGGLS MRGRQLIEHA GVSRRQWGAF MPGVPDVSEF PSRTWSRLQA RLWKEANPEL LTYAPGGGYR PLRRALADYL RVARSVKCSP DQVIITTGIH QSIDLAVRLL SDIGDRAWVE EPCYWGVRSV LQATGLTLTP VPVDQEGIDP SAADMQQPPR LVLVTPSHQY PLGMVMSLAR RRMLLEYARR HRCWIIEDDY DSEFRYGSRP LASLQGLDDG GRVIYVGSLG KMLFPGLRMG YMVVPEHLVD TFRTGLSELY REGQLMQQAV LAEFIMDGHL TSHVRRMRTL YGERRQLLID AIHARFGDAL PVMGDEAGLH LVLGLPDACD DRAVTQSAFD AGVIVRPLTS YYSRLDTARR GLLLGYACVA HEGIGPAFDT LAATIEQHLP RHFTRAA
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