Gene BamMC406_3809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3809 
Symbol 
ID6181520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp797615 
End bp798709 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content67% 
IMG OID641683580 
Producttriacylglycerol lipase 
Protein accessionYP_001810492 
Protein GI172062841 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.474224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.903187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAT CGATGCGTTC CAGGGTGGTG GCAGGAGCAG TGGCATGCGC GATGGGCGTC 
GCGCCGTTCG CGGGGACGAC CGCGGTGATG ACGCTCGCGA CGACGCATGC GGCGATGGCG
GCCACCGCGC CGTCGGACGA CTACGCGACG ACGCGTTATC CGATCATCCT CGTGCACGGG
CTCACCGGCA CCGACAAGTA CGCAGGCGTG CTCGAGTACT GGTATGGCAT CCAGGAGGAC
CTGCAGCAGC ACGGCGCGAC CGTCTACGTC GCGAATCTAT CCGGATTCCA GAGCGACGAC
GGTCCGAACG GACGCGGCGA ACAGCTGCTC GCTTACGTGA AGACGGTGCT CGCCGCGACC
GGTGCGACCA AGGTCAACCT GGTCGGTCAC AGCCAGGGCG GCCTCACGTC GCGCTATGTG
GCGGCCGTCG CGCCCGATCT CGTCGCGTCG GTGACGACGA TCGGCACGCC GCATCGCGGC
TCCGAGTTCG CCGACTTCGT GCAGGGCGTG CTCGCTTACG ATCCGACCGG GCTGTCGTCG
TCGGTGATCG CCGCGTTCGT CAATGTGTTC GGGATCCTGA CGAGCAGCAA CAACAACACG
AACCAGGACG CGCTCGCCGC GCTGAAGACG CTGACGACCG CCCAGGCGGC CACGTACAAC
CAGAACTATC CGAGCGCGGG CCTCGGCGCG CCGGGCAGTT GCCAGACGGG TGCGCCGACG
GAGAGCGTCG GCGGCAATAC GCACCTGCTG TATTCGTGGG CCGGCACGGC GATCCAGCCG
ACCGTTTCCG CGTTGGGCGT CACGGGCGCG GCCGACACCA GCACGATTCC GCTGGTCGAT
CCGGCGAACG CGCTCGACCT GTCGACGCTT GCGTTGCTCG GCACGGGCAC GGTGATGATC
AATCGCGCGT CGGGCCAGAA CGACGGGCTC GTGTCGAAGT GCAGCGCGTT GTACGGGAAG
GTGCTGAGCA CGAACTACAA GTGGAACCAT GTCGACGAGA TCAACCAGTT GCTCGGCGTG
CGCGGTGCGT TTGCGGAAGA CCCGGTCGCG GTGATCCGCA CGCATGCGAA CCGGCTGAAG
CTCGCGGGCG TGTGA
 
Protein sequence
MARSMRSRVV AGAVACAMGV APFAGTTAVM TLATTHAAMA ATAPSDDYAT TRYPIILVHG 
LTGTDKYAGV LEYWYGIQED LQQHGATVYV ANLSGFQSDD GPNGRGEQLL AYVKTVLAAT
GATKVNLVGH SQGGLTSRYV AAVAPDLVAS VTTIGTPHRG SEFADFVQGV LAYDPTGLSS
SVIAAFVNVF GILTSSNNNT NQDALAALKT LTTAQAATYN QNYPSAGLGA PGSCQTGAPT
ESVGGNTHLL YSWAGTAIQP TVSALGVTGA ADTSTIPLVD PANALDLSTL ALLGTGTVMI
NRASGQNDGL VSKCSALYGK VLSTNYKWNH VDEINQLLGV RGAFAEDPVA VIRTHANRLK
LAGV