Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3805 |
Symbol | |
ID | 6181315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 793240 |
End bp | 793878 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641683576 |
Product | hypothetical protein |
Protein accession | YP_001810488 |
Protein GI | 172062837 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.404034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.773364 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAAG CGTTCTTCGT TGCGGCCTAC CGGCTGATCG CCGCGTTGCT CGCGGTGTCG ACCACGCTGC ACAGCGTCGC CGACTACTGG GCCATGCCGA CCTTTCATCT CGGCAACTAC CTCAGCTACT TCACCCAACT GAGCAGCCTG TATGCGGCGG TGATGCTGAT CGCGGGGCTG TCGCGCGTCA CGCGCCCCGG CTCGGCCCGC TACGAATCGA TGCGCGGCGC CGCCGTGCTC TACATGCTGA TCACCGCGAT CGTCTACGAA CTGCTGCTCG CCCGGCTCGA TGCGCTGCTG CACGTCACGC CGCCCCTCAA CAACTGGGTC CTGCACCGGA TCGTGCCGCT CGTGGTGCTG TGCGACTGGC TGTACGTGGA GCCGCGCTCG CCGATCCCGT GGCGCAGCGC GCTCGCATGG CTCGCCTTTC CGATCGTCTA TCTCGGCTAT ACGCTCGTGC GCGGCTCGGT GGAGAACTGG TATCCGTATC CGTTCGTCGA TCCGCGGCCG CACGGCTATC TGCCGGTCGC GATCCAGTGT TCGCTGATCG CGCTCGGCGC GACGGGGCTC GCGGTGGGCA TTCGCTGGCT CGGCAATCAT GCGAGGCAGG CTGACGCCAC GGAGCTCAAG GAAGGATGA
|
Protein sequence | MSKAFFVAAY RLIAALLAVS TTLHSVADYW AMPTFHLGNY LSYFTQLSSL YAAVMLIAGL SRVTRPGSAR YESMRGAAVL YMLITAIVYE LLLARLDALL HVTPPLNNWV LHRIVPLVVL CDWLYVEPRS PIPWRSALAW LAFPIVYLGY TLVRGSVENW YPYPFVDPRP HGYLPVAIQC SLIALGATGL AVGIRWLGNH ARQADATELK EG
|
| |