| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3796 |
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| Symbol | |
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| ID | 6180421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 782503 |
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| End bp | 783330 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683567 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001810479 |
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| Protein GI | 172062828 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.323175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAG CGAAGAAGCT GCGCCGTACG TCGACGGGCG GCTACGCGCG CGGCGACGAG
ACGCGTCAGC GAATCATCGA TGCGGCGATC GAGCTGTTCG GCGAACACGG ATTCGCGGGC
GCATCGACGC GCGACATCGC CGCGAAGGCC GGCGTGAACG CGCCGGCGCT GCAGTACTAC
TTCGAGAACA AGGAAGGCGT GTACCGCGCG TGCGTCGAGG CGATGGCCGA GCTCGGCTGG
AGCGTGCTCG GGCCGGCGGT CGAGCATGCG CGTGCGGCGC TCGACGCGGA GGCGGACGTC
GACGCGCTGA TCGACGCGTT CATCGGCATC CTGCGCACGC TGGCCGACCG GATCTTCACG
GTGCCGAAGA CGCTGGGGCA ACGGATGTTC TTCGCACGCG AGCAGGTCGG GCAGGAGCCG
GCAGGCGCGA CCGACATTCT GATGAAGCGC GTGCGCAAAC CGCTGAACGA CGTGAGCGCC
GAACTGGTCG GCCGGATCTC GGGGCGGCCG GCCGACGACC CCGTCACGCG GTTGCGCACG
ATGAGCCTCT TCGGGCAGTT GACGGTGTTC CACCTCGTGC AGCGCTCGGC ACTGCAGTTG
CTCGACTGGG ACGGGTTCGA CGGTGAAGGC GGCGCGCTGC TGATGGCGAC GATCGCCGAC
CAGACGCGCG TGCTGCTCGA ACATTGGCAT GCGCAGCGCG GTGCCATCAC CGACGAAGCG
TCGGTCGCCT TACGGCGCGG CGCGGGCGCG AAACGTACGG CGAAGCCTGC TGCATCGACC
GCCGCCGCGA AGCGCGTGCC GCGCGCGAAG AAGCCGGCGG CACGCTGA
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| Protein sequence | MNEAKKLRRT STGGYARGDE TRQRIIDAAI ELFGEHGFAG ASTRDIAAKA GVNAPALQYY
FENKEGVYRA CVEAMAELGW SVLGPAVEHA RAALDAEADV DALIDAFIGI LRTLADRIFT
VPKTLGQRMF FAREQVGQEP AGATDILMKR VRKPLNDVSA ELVGRISGRP ADDPVTRLRT
MSLFGQLTVF HLVQRSALQL LDWDGFDGEG GALLMATIAD QTRVLLEHWH AQRGAITDEA
SVALRRGAGA KRTAKPAAST AAAKRVPRAK KPAAR
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