| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3784 |
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| Symbol | |
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| ID | 6179382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 759721 |
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| End bp | 766314 |
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| Gene Length | 6594 bp |
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| Protein Length | 2197 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641683555 |
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| Product | DNA helicase related protein |
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| Protein accession | YP_001810467 |
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| Protein GI | 172062816 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.650978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCG GGGTTGTTGA GCCGACGGAT GAATCGGCTA TGCCTTATTG CGTTCAGATT
CAGGCGGCCG TCGCTGGGCG GGTCAATCTG GCGGACTTCC AGAACGCGGT GCCCGTGATG
CGGGAGCTTT CCATAGTTAA CGAAACGGAA GACGCATTCC GGGACCTGAA GCTCACCGCG
ATTTCTGACC CACCATTCCT CAAGCCCAAG ACTTGGCACC TAGACCATCT GGCGGCGGGG
CAGACCCTGC GTATCACGGA CCTTGATTTG TCTCTCGACG GTCCGCTGCT CGGCCGCCTG
ACTGAATCGG AAAGGTCGGT GGTCACGCTC ACACTCACTG CGCCAAACCG AGAGTCAGCC
GAGGTCGCTG TTTCCGAGCA GACAGTGGAG CTTCTTCCAA GGAATCAGTG GGGCGGCCTG
TCGTCGCTGC CGGACATGAT TGCGGCCTTC GTTCAGCCGA ACGAGCAGGC AGTCGAACGT
GTGCTCAAGC AGGCTGCGGA GGTGCTACGC AAAGCGGGGA AGCCCGGCGG CATCAATGGC
TACCAGGAAG GTGCAAGGCG CGCATGGGAA CTCGCTTCTG CTATCTGGAA TGCAATTGGT
GCGATGGGAC TCGACTATGC CGTGCCTCCT GCGAGCTTCG AGCGGGACGG ACAGAAAGTG
CGCGGGCCCA GTCAGATTGC GGAATCTGGG CTCGCTACCT GTCTTGACCT GGCTTTGTTC
GTCTGCGCGG CATTGGAGCA GGCGGGCCTT AATCCAATTC TCGTCTTCCA GCAGGGGCAC
GCTTTTCCCG GCGTCTGGCT GAAGCCCGAA GAGTTCTCAA CCACTGTCAT CGACGACATC
ACCGCTCTGC GGAAGCGGGT GAAGCTCAAA GAGATGGTCC TGTTCGAGTC GACCCTCCTT
GCACAGAGGC CGCTGCCGAC TTTCAGTTTC ACTGCGGCAA AAGGTGAGGA ACACATCTCT
GAGGACGAAG AGCCGAAGTT CGAGCTGGCA ATTGATATTC GACGCGCACG GATGCAGCGC
ATCAAACCGC TTGCTAGTGA AAACGCTGTA GTTCGAGGCA CAGCAGGCAC CGAGATAGCT
GACGACCTGA CTCCGCGGTG GGAGGATGCT CCCGAGTCCT TGGGGGAGCT CGACGACGCA
CATTCAGACG ACGGGCAGGA GCGGCCGGAG GACCGTCTCA CACGCTGGCA GCGAAGGCTC
CTCGACCTGT CACTCAGGAA CAATCTGCTG AGCTTCAAGT CGGGAAAGAA GTCCCTGAAG
CTCGATGCGC CCGAGCCAGG ACTGCTTGAG GATGTTCTGG CGGAGGGACA TGCGCTAAAG
CTGCTGACCC GTCCGGACCT CATGGATGGT TCGGACCCAC GCAGCCAGGC GATCCATGAG
GCGCGCGAGC GCGAACATAT TCGACGCCAG CACGCTCTCG ACGCGTTGAC GCGCAAGGAA
GTGTTTATCG GGTTGCCGCA GGACGAGATG GATTCTCGCC TGACTGAATT GTTCCGGAAT
TCCCGGACCA CCTTGCAGGA GGGTGGTTCG AATACACTGT ACCTCGCACT CGGCTTCCTA
TCGTGGACGC GCGACGACAA AGACGACAAG AAATATCGTG CACCTCTCAT CCTCGTACCT
GTCACACTCG AGCGTCGCAG TGCGCGCTCT GGCTTCAGTC TGAAGCTTTA CGACGAAGAG
GCCCGATTCA ATCCGACGCT CATTGAAATG CTGCGTCAGG ACTTCGAGCT CGAACTCGGT
GTGAACGACG TCGAGCTGCC CAAGGATGAC TCAGGCCTCG ATGTAGCCGG AATCTGGAAA
ACGGTGTCCC ATGCCATCAA GGACATCAAG GGCTGGGAGG TCGTGGAAGA AGTCGTTCTG
GCCTCGTTCT CGTTCGCCAA ATACTTGATG TGGCGGGACC TCACCGAACG TACCGAGCAG
CTCAAACAGA ACGCGGTAGT TCGACACCTC ATCGATACTC CGCGCGATTC GTATCAGAGC
ACGGTGGAGT TCCCTGATGT CAGGCGGCTG GACGTTGAGT TGCCAGTGAA GGAGACGTTC
TGCCCTCTAC CAGCAGACTC GTCGCAGCTT TCCGCGGTGG TCGCGGGCAG CAAAGGCAAG
GATTTTGTTC TGATTGGGCC ACCGGGCACC GGAAAGAGCC AGACGATTGC AAATCTCATT
GCGCAGTGCC TCGCCGAGCG CAAGCGCGTT CTGTTCGTTT CCGAGAAGAT GGCCGCGCTG
GATGTCGTCT ACCGGCGCCT CGCGGACGTC GGCCTCGGGA ATTTCTGTCT CGAGCTTCAT
TCCAGCAAGG CACGAAAGAC TGATGTTCTT GAACAGTTGA AAACTTCATG GGATGCGTCC
GCTGTCCTCG CGCCCGAGCA ATGGCACGCA GAAGCGGTCC GACTTGAAGG ACTGAGGTCC
AAACTAAATG GATATGTTGA ACGACTCCAC CATCGGCACT CGAATGGCCT GAGCGTTTAT
GAGGCAATCG GTCGAGTCGT CGGCGGGCAT GACTTGCCAG CGCTCCGACT GACATGGTCG
TCTACCCAGG CGCATGACAT GGAAGCCATG CGGGGCCTTC GCGAAACCGC CGAACTGCTC
GATGTCAATG CCAAGGCATT CGGTGAAGAG AAGTTGACGT CAACCCCGCT GGCGCATGTG
GCTCAGACCG AATGGTCGCC TCTTTGGGCG GCCGCGCTGG ACGACGCTGC CCGTGCAGTA
CCAGACCTTG CGGCGCGCTT CGAGAAAGCA GCGGCTGACC TGTGTCAGGC TATAGGGCTA
CCGGACCTGC CGTTGGACCC CCGAGTACGC GATGGTCTAC GGATGCTCGC CGCAGTGCTG
CCGGCCGCGT CTGGTTACGA CTGGCGTTTC GCACTTCGTC CGGATGCAAA GGCTATTGCG
GATGCATTGC GTCAGGCAAC ACCAATGTTG CGGCGGTATC GGGAACTGCT TGGCACGCTG
CCGACACCTT GCTCGAATCA GACACTCGAT GACTTGCGAC TCGGTATTAG CCAGTTGCAA
CGCGATTCGG AATTGCACGC GGCTCTTTCC TTGCCTTGGA GCGAAACTCT GCGCGCTCGC
CTCACCAAAG GTATTGAACT GCTGCGCACC CGGCTTGACG TCCTCGGCCA GCTTTCGATT
CCATACAAGG AAGGAATCCA GACACGGACA ATTGCCGAAT TGCAGTCCGA CCAGCGTGAG
CTCAAGGATT CGGGCTGGCC GATGAGCATG ATCCGCAAGC GCTCCTTGGC GAAGAAGCTC
AGGGAGCTTG CAGGCGGAAA CGCTGCTGAA CCGAACATCG ATGGTGATAT CGAGTGTCTC
GCGCAAATCG ACGCTCTCAA TAACGAAATC AAGGAATACG ATGACCTGTT CTCGCTCACT
TCGAGTGTAT GGACTGGACT CAAAACCGAC CTTGACGTAG CGCGTGCACT CCTGTCATTC
CAGACGGCCC TCGAGCGTGC TCGTGGTCGC GCGAACTGGG ATGACGTGGG CCTCGACCCA
GTTAGCAGAG GGGAATGCGG CGATGCCGCT CGAGATGACT TGGAGCGGAT GCGTGAGCTG
CGAAAAATCG AGCAGATTAT TGCGAGTCTC GCCTATCTGG AAGTCGAGAC GGGCCACGTC
TGGGCCGGCT ACAAAACAGA TGTTCTAGTC GCGAAGGCAT ATGTGCCATT TCAAATGGCG
CTCTCTGCTG CGCGAGCAGA AACCCACTGG GCGGACGACG GATTTGCGGT AATCGAGTCT
GGACGCGCGG GCCCAACGGC GGCTGCAAAC ATTCGAGACA TGCGCGAATT GGTTTCTCTG
CATGCCCGAA TTCAGGAGTT CGCGGACCTG TCAGGTAAGA CGTCCGGTCT GTGGAGCGGT
CTGCAAACCA AGATTGACGG CATCGAGCCG GCCCTGAAGT TTTTCGAGTC TCTTTCGGCT
GCACTGGCTA ACCTCGCGAA TACACCTGAC CTGCTTGCGG CGGTCAAAGC CCCCGTGGCT
CTTCTGCTTG GTGATAGCAA TATCCTGCTT GAGCCGTCAG GCATCGTTGC TGGTATGGGG
CGCACATATG CCGAAGCGCT GCAGTCGTTT AATGACGTTG TCGCTCAATT TGCCACGGCC
AGCGGGCTGG CACCTTCAGA GCACGCGCCC CTTCATTCGC TTCTTCCCGG GCAAGTGGCG
GAAAGCGCCC GGCAGGTAGT GCAAAACCTT AACCGGCTGA AACTCTGGTG CGCCTGGCGG
AAAGTCCGTC AGCACGCACT TTCGCTCGGA TTGGCCCCAT TGGTTTCCGG TATCGAAGAC
GGCAACATTC AGCGTGGGCA GGTGAAGGCG ATCTTTGAGA CCAACTACTG CCGCTGGTGG
TTGAATGCTG TCGTTGATGG CGACGAGGTT CTGCGCAACT TTGTGTCCGC CGAGCACGAA
AAACGCATCC AGGATTTCCG CGAGCTTGAT GAGCAGTTCG TTGCTCTGAC TCAGGCCTGG
GTCAGAGCGC AACTTTCGTC CGGTCTTCCT TCACCGGCGA GGGTCGCATT GAGCTCCGAG
TGGGGACTCC TGCGTTATGA GATGCAGAAG AAGACCCGAC ATCTTCCGTT GCGCGAACTT
ATGTCGAAGG CTTCTGGTGC AATTCTCAGG TTGACTCCTT GTCTGCTCAT GAGCCCGCTG
TCGATTGCCC AGTATCTACC GGCAGAGACC TCTGACTTTG ATGTCGTGGT CTTCGACGAA
GCTTCTCAGA TTCCGGTCTG GGATGCGATT GGTGCGATGG CGCGGGCGCG CCAAGTCATC
ATGGTCGGTG ACCCGAAGCA GCTGCCGCCG ACCAGCTTCT TCGACCGTGC GGAATCCGAC
GTCGACGATA CGGATGTCGA GGCGGAACTC GAGAGCATCC TGGAAGAGTG TATCGGAGCG
AACCTGCCGA CGATGAAACT GTCGTGGCAC TACCGCAGCC GGCACGAGAG CCTTATTGCC
TTCTCGAACT ACCGGTACTA CGGCGGCGAT CTGGTTACAT TCCCGAGTCC TGTCACCAAC
GACAGGGCCG TCAGCTTCAA TCTCGTGACC GATGGCCATT ACGAGCGCGG CGGCGCCCGG
ACCAACAAAC CAGAGGCGAA GGCGCTTGTG GTCGACTTGG TCGGCAGACT GAAATCCCCG
GGATTCATCG ACAGTAGGAT GACGGTCGGT GTCGTCACGT TCAACACCGA GCAGCAGCGC
CTGATTGAAG ACCTCCTTGA CGAGGAGCGT CGCAAGGACC CGTCAATCGA GCCGCACTTT
GCCGAGTCAG CGCTTGAGCC GGTGTTCGTC AAGAATTTGG AAAGCGTTCA AGGTGACGAG
CGGGACATTA TGTACTTCTC GATTACCTAC GGCCCTGGCA TTGATGGCAC GATGCCAATG
ACCTTCGGTC CGATGAACCA GCAGGGTGGG GAGCGGCGTC TCAATGTTGC CATCACGCGT
GCCCGCCAGG AACTGCGTGT ATTTGGCAGC TTCAAGCCGG AAAAAATGGA CCTGTCCCGA
ACGCAGGCGC TGGGTGTTCG GGACCTGAAG CACTTCCTCG AGTTTGCCGA GCGAGGAGCG
CGCGCTTTGG GTGAAGCAGT TGCCGGCAGC ATTGGCGACT TCGATAGCCC GTTTGAGAAG
GCAGTCTGTG TCGCGCTGGC GGAGAGGGGC TGGACGGTTC ATCCTCAGGT GGGCGTATCG
GCGTTCCGTA TTGACCTTGG CGTGGTGGAC CCCGATGCTC CTGGCCGCTA TCTGGCAGGC
GTGGAGTGCG ACGGCGCCAC CTACCATCGC TCAGCGACGG CTCGTGACCG CGATAAGCTG
CGCGAGCAGG TTCTGAGAGG ACTCGGTTGG GAAATTGTCC GCATCTGGTC GACGGACTGG
TGGGTTGACA TGCCGGGCAC TGTCGAGAAA GTGGATAGTC AACTGCGAGC TTTGCTTGCT
GTCAGACGAG AAGCGGAGGC AGCGGAGATG CAAAGCGCCG CAGCTATCGC GGAGGAGGTT
CTCGCCGTTG CAAAGTCGGC TTCAGGCAGC GCATTCAGCA ACGCAAATGC AGCGGAAGAT
GTTGCAGCGA GCGGTGAGGC TGCAGTCTCC GAAGATGAAG CGCCCGTCAT GTACGCCCGC
GCCGCGCCAA CGCAGATATC CGTTGAGCGC GAGGAGGCGA TATTCGTTGA AGTTGACTTG
ACGATTTCCG ACCACGAACG TGACCCGGAG CTGTTTTTCG CTCACTCGTA CGACGAACGT
CTGCTCGCGA TGATTACTGC AGTCGTCAAC GTCGAGGGAC CCGTGCGTGA CGAGGTTCTG
GCAAGACGTA TCGCTCGAGC GCACGGATGG TCCCGAACGG GCTCTCGCAT TCTGAATCGC
GTGATCGACC TCGCATCGAA GCACTTCGAT GCAGAGACAG AAGATGTTGG CTTGTTTATC
TGGCCTAAGT CCGTTGGTGA TAAGGCAGCT TTTGCATTCA GAAGTCCGAT GCCCGGAGCT
ACACGACCGG TAGATGAGGT TTCAATTGCA GAGCTGAGGA CGCTTGCGAC GAAACTGCAA
GCAGCGGGGC ATGACGAAGA GTCCGGGCTC AACGCCATGA GTAGAGAGCT GGGCCTTCTT
CGGCTGCGCG GTGCTAGCAG GGAGCGTTTG GAGCAAGTAT GGCGATGTGA ATGA
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| Protein sequence | MNTGVVEPTD ESAMPYCVQI QAAVAGRVNL ADFQNAVPVM RELSIVNETE DAFRDLKLTA
ISDPPFLKPK TWHLDHLAAG QTLRITDLDL SLDGPLLGRL TESERSVVTL TLTAPNRESA
EVAVSEQTVE LLPRNQWGGL SSLPDMIAAF VQPNEQAVER VLKQAAEVLR KAGKPGGING
YQEGARRAWE LASAIWNAIG AMGLDYAVPP ASFERDGQKV RGPSQIAESG LATCLDLALF
VCAALEQAGL NPILVFQQGH AFPGVWLKPE EFSTTVIDDI TALRKRVKLK EMVLFESTLL
AQRPLPTFSF TAAKGEEHIS EDEEPKFELA IDIRRARMQR IKPLASENAV VRGTAGTEIA
DDLTPRWEDA PESLGELDDA HSDDGQERPE DRLTRWQRRL LDLSLRNNLL SFKSGKKSLK
LDAPEPGLLE DVLAEGHALK LLTRPDLMDG SDPRSQAIHE AREREHIRRQ HALDALTRKE
VFIGLPQDEM DSRLTELFRN SRTTLQEGGS NTLYLALGFL SWTRDDKDDK KYRAPLILVP
VTLERRSARS GFSLKLYDEE ARFNPTLIEM LRQDFELELG VNDVELPKDD SGLDVAGIWK
TVSHAIKDIK GWEVVEEVVL ASFSFAKYLM WRDLTERTEQ LKQNAVVRHL IDTPRDSYQS
TVEFPDVRRL DVELPVKETF CPLPADSSQL SAVVAGSKGK DFVLIGPPGT GKSQTIANLI
AQCLAERKRV LFVSEKMAAL DVVYRRLADV GLGNFCLELH SSKARKTDVL EQLKTSWDAS
AVLAPEQWHA EAVRLEGLRS KLNGYVERLH HRHSNGLSVY EAIGRVVGGH DLPALRLTWS
STQAHDMEAM RGLRETAELL DVNAKAFGEE KLTSTPLAHV AQTEWSPLWA AALDDAARAV
PDLAARFEKA AADLCQAIGL PDLPLDPRVR DGLRMLAAVL PAASGYDWRF ALRPDAKAIA
DALRQATPML RRYRELLGTL PTPCSNQTLD DLRLGISQLQ RDSELHAALS LPWSETLRAR
LTKGIELLRT RLDVLGQLSI PYKEGIQTRT IAELQSDQRE LKDSGWPMSM IRKRSLAKKL
RELAGGNAAE PNIDGDIECL AQIDALNNEI KEYDDLFSLT SSVWTGLKTD LDVARALLSF
QTALERARGR ANWDDVGLDP VSRGECGDAA RDDLERMREL RKIEQIIASL AYLEVETGHV
WAGYKTDVLV AKAYVPFQMA LSAARAETHW ADDGFAVIES GRAGPTAAAN IRDMRELVSL
HARIQEFADL SGKTSGLWSG LQTKIDGIEP ALKFFESLSA ALANLANTPD LLAAVKAPVA
LLLGDSNILL EPSGIVAGMG RTYAEALQSF NDVVAQFATA SGLAPSEHAP LHSLLPGQVA
ESARQVVQNL NRLKLWCAWR KVRQHALSLG LAPLVSGIED GNIQRGQVKA IFETNYCRWW
LNAVVDGDEV LRNFVSAEHE KRIQDFRELD EQFVALTQAW VRAQLSSGLP SPARVALSSE
WGLLRYEMQK KTRHLPLREL MSKASGAILR LTPCLLMSPL SIAQYLPAET SDFDVVVFDE
ASQIPVWDAI GAMARARQVI MVGDPKQLPP TSFFDRAESD VDDTDVEAEL ESILEECIGA
NLPTMKLSWH YRSRHESLIA FSNYRYYGGD LVTFPSPVTN DRAVSFNLVT DGHYERGGAR
TNKPEAKALV VDLVGRLKSP GFIDSRMTVG VVTFNTEQQR LIEDLLDEER RKDPSIEPHF
AESALEPVFV KNLESVQGDE RDIMYFSITY GPGIDGTMPM TFGPMNQQGG ERRLNVAITR
ARQELRVFGS FKPEKMDLSR TQALGVRDLK HFLEFAERGA RALGEAVAGS IGDFDSPFEK
AVCVALAERG WTVHPQVGVS AFRIDLGVVD PDAPGRYLAG VECDGATYHR SATARDRDKL
REQVLRGLGW EIVRIWSTDW WVDMPGTVEK VDSQLRALLA VRREAEAAEM QSAAAIAEEV
LAVAKSASGS AFSNANAAED VAASGEAAVS EDEAPVMYAR AAPTQISVER EEAIFVEVDL
TISDHERDPE LFFAHSYDER LLAMITAVVN VEGPVRDEVL ARRIARAHGW SRTGSRILNR
VIDLASKHFD AETEDVGLFI WPKSVGDKAA FAFRSPMPGA TRPVDEVSIA ELRTLATKLQ
AAGHDEESGL NAMSRELGLL RLRGASRERL EQVWRCE
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