Gene BamMC406_3707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3707 
Symbol 
ID6181241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp670467 
End bp671483 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content70% 
IMG OID641683477 
Productalcohol dehydrogenase 
Protein accessionYP_001810390 
Protein GI172062739 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.226872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGACAC CCGTGAACCG CCAGCTGCTG CTGAAAACGC GCCCGGATGG GCGGGTCGGC 
CGCGAACACT TTTCGCTCGT CGAAACACCC GTGCCGGCGC TCGCCGACGG CGAAGTGCTC
GTACGCGTGC TGTATCTGTC GATGGATCCG ACCAACCGCG TATGGATGAG CGACGTGCCG
CAATACCTGC CGCCCGTCGC GATCGGCGAG GTGATGCGCG CGCTCGGCAT CGGGCGCGTG
GTTGCGTCGC GCCACGCGGG TTTCGCGGAA GGCGACCTCG TGCAGGGGCT CGTCGGCTGG
CAGGACTATG CGGTCGTCGC GGCCGACCAG GCCGCGCAGC TCGTGAAGCT GCCCGCGCAG
TCTGGCCTGC CGCTGCCGAC GCTGCTCGGC GCGTGCGGGA TGAGCGGCCT GACCGCGTAC
TACGGGCTGA CCGACATCGC GCCGGTGCAG CCCGGCGAGA CGCTCGTCGT GTCGGCGGCG
GCCGGCTCGG TCGGCTCGAT CGCCGGCCAG ATCGGCAAGA TCCACGGCGC GCGGGTGGTC
GGCATCGCGG GCGGCGCGGA CAAGTGCCGC TACCTGACCG AGACGCTCGG CTTCGACGCG
GCCGTCGACT ACAAGGCCGA CGATTTCCGT GAGCAGTTGA AGGCGGCGAC GCCGGACGGC
GTGCACGTGA ACTTCGAGAA CGTCGGCGGC GAAGTGATGC GCGCGGTGCT GTCGCGGATG
GTGATCGGCG GGCGTGTCGC GCTGTGCGGC GTGATCTCGA ACTACAACAG CGGCCGCGCG
GCGGACGACG TCGGCGTGCT GATCTCGAAG CGCATCACGA TGCGCGGCTT CCTGATCCTC
GACTACCGCA AGAGCCGCGA AGCGGTGCAG ACGCTCGCCG GCTGGCTGCG CGACGGCCGC
CTCAAGGCCG AGGAAACCGT GGCTGACGGG CTCGAAAACG CCCCCGACGT GCTCAATCGC
CTGTTCGACG GCGACCATCG CGGCAAGCTC GTGCTGCGCG TCGATCCCGA CGCGTGA
 
Protein sequence
MSTPVNRQLL LKTRPDGRVG REHFSLVETP VPALADGEVL VRVLYLSMDP TNRVWMSDVP 
QYLPPVAIGE VMRALGIGRV VASRHAGFAE GDLVQGLVGW QDYAVVAADQ AAQLVKLPAQ
SGLPLPTLLG ACGMSGLTAY YGLTDIAPVQ PGETLVVSAA AGSVGSIAGQ IGKIHGARVV
GIAGGADKCR YLTETLGFDA AVDYKADDFR EQLKAATPDG VHVNFENVGG EVMRAVLSRM
VIGGRVALCG VISNYNSGRA ADDVGVLISK RITMRGFLIL DYRKSREAVQ TLAGWLRDGR
LKAEETVADG LENAPDVLNR LFDGDHRGKL VLRVDPDA