Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3692 |
Symbol | |
ID | 6181114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 653493 |
End bp | 654539 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641683462 |
Product | polysaccharide export protein |
Protein accession | YP_001810375 |
Protein GI | 172062724 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.427794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.965292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGGGC CCGCGACGCT CGCGGTCTCC GGCGGAGCCG GGAAGGTGCC TGCAGAGTCG ATGCAGATTC CGATCGAAGA GATCAACGCG ACGCTGATTC GCCAACTCGG CACGGCTGCG AGCGCCGACG ACGGCGCGCG TTTCAAAGCG CTTGTCGGAA AGGCGCAGCC CTATACGCTG GGGGCCGGCG ACGTCCTTCA GATCACCGTC TGGGATCATC CGGAACTGAC GCAGGCTCAG GGCGCGCCGC AACAGACCAA CGGACGCCCG TTCGATCCGC CTCAAGGTTT CGTCGTCGAT TACGTTGGCA ACGTGCAGGT GCCGTATGCG GGGAACGTGC ATGTGGCCGG ACTGACGATC GACGACGCAC GCAAGGCGAT CACCAATGCG ATGGCACGCT ACTTTGTCAC GCCGAAGATC ATGGTCCGGG TCGCCTCGTT CAGGGCGAAG CAAGTCTACG TCGACGGCGA GGTTCGTACG CCGGGCAATG TACCGATCAA TGATATTCCG ATGACATTGT TCGAGGCGGT CAATCGTGCG GGCGGATTCG CACCCACGGC GGATCAGAGC CATCTGGTCC TCGTGCGCGA TGGCGTGTCT TACCCGCTCG ACCTCCCGGG CATGCTTGCA CGCGACGTGA ATCCCGCGTC GATTCTGCTG CGCGACGGCG ATTCGCTTCG GGTCGTACCG CGCGAGGACA ACGGCGTCTA CGTGATGGGC GAGGTCACCA AGCCGGTGAC GGCATTGCCG CTGCGAACCG GCAAGCTGAC CCTGAGCGAT GCGCTCTCTC AGGCCGGCAG CCTCAACAGC GCGAGCGCCG ACGCCGCGCA GCTCTACGTG ATCCGCGGCG CGCAAGGCGA AGCGCCGCAG GTCTATCACC TGGATGCGCG ATCGCCGGTA TCGATGGTGC TCGCAAACCA GTTCGAGTTG CGACCGAAAG ATGTCGTCTA TGTCGACGGG AACGGGCTCG TCCGGTTCAG CCGGGTTCTG AGCTTGTTGT TGCCCGCGAT CAATGCAGGC CTGACAGCAG CAATCGTCTC GAAATGA
|
Protein sequence | MTGPATLAVS GGAGKVPAES MQIPIEEINA TLIRQLGTAA SADDGARFKA LVGKAQPYTL GAGDVLQITV WDHPELTQAQ GAPQQTNGRP FDPPQGFVVD YVGNVQVPYA GNVHVAGLTI DDARKAITNA MARYFVTPKI MVRVASFRAK QVYVDGEVRT PGNVPINDIP MTLFEAVNRA GGFAPTADQS HLVLVRDGVS YPLDLPGMLA RDVNPASILL RDGDSLRVVP REDNGVYVMG EVTKPVTALP LRTGKLTLSD ALSQAGSLNS ASADAAQLYV IRGAQGEAPQ VYHLDARSPV SMVLANQFEL RPKDVVYVDG NGLVRFSRVL SLLLPAINAG LTAAIVSK
|
| |