| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3631 |
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| Symbol | |
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| ID | 6179238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 576139 |
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| End bp | 577713 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683401 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001810314 |
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| Protein GI | 172062663 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.184046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG CGTTTTCCGG CGACCCCGCG TCGCAACCGA CGAAGCAGCG CGTCTTCGCG
TTCGCGCTGA TGTGCGTCGG CTTCTTCATG GCGACGCTCG ACATCCAGAT CGTCGCGTCG
TCGCTGCGCG ACATCGGCGG CGGCCTGTCC GCCAGCCAGG ACGAGCTGTC GTGGGTGCAG
ACGGCCTACC TGATCGCCGA GATCATCGTG ATCCCGATGT CGGGCTGGCT GTCGAAGGTG
ATGTCGACGC GCTGGCTGTT CGTCGCGTCG GCCGTCGGCT TCACGATCAC GAGCATGCTG
TGCGGGCTCG CGTGGGACAT CAACTCGATG ATCCTGTTCC GCGGGCTGCA GGGCGCGCTC
GGCGCCGCGA TGATCCCGAC CGTGTTCACG ACCGCGTTCG TGCTGTTCCC GGGCAGGCAG
CGGCTGATCG CGTCGACGAC GATCGGTGCG CTCGCGTCGC TCGCGCCGGC GATCGGGCCG
GTGATCGGCG GCTGGATCAC CGATCAATGG TCGTGGCACT GGCTGTTCTA CCTGAACCTC
GTGCCGGGCA TCGCCGTGGC CGTGCTGGTA CCGCGCTACG TACATATCGA CGAACCCGAC
CCGAGCCTCC TCAAGCGCGG CGACTATCTC GGCATCGCGC TGATGTCGGG CTTCCTCGGC
TGCCTCGAAT ACGTGCTGGA GGAAGGGCCG CGCAAGAACT GGTTCAGCGA CGACGCGATC
GTGATCTGCG CGTGGATCTC CGCCATCTGC GGCTTCCTGT TCATCGTGCA CGCGCTGACC
GCGGACGATC CGGTCGTCGA CCTGCGCGCG CTCGCCGTGC GCAACTTCGG GATCGGCAGC
CTGCTGTCGT TCGTGACGGG CATCGGCATC TTCGTGACGG TGTTCCTCAC GCCGCTGTTC
CTGTCGCAGG TGCGTGCGTT CAGTTCGCTG CAGATCGGCA TCGCGCTGCT GTCGGTCGGC
GCGTTCCAGC TCGTCGCGCT CTGCGCGTAT GCGTTCGCCG CGCGCTACTT CAGCATGCGC
GCGCTGCTCG TGTTCGGGCT CGTCTGCTTC GGCCTCGGCT GCTACCTGTA CACGCCGATC
ACGCACGACT GGGGCTGGCG GGAACTGCTG CTGCCGCAGG CATTGCGCGG CATCGGCCAG
CAGTTCAGCG TGCCGCCGAT CGTGACGATG GCCTTGGGCT CGCTGCCGCA GTCGCGGCTG
AAATCGGCGA GCGGCCTGTT CAACCTGATG CGCAACCTGG GCGGCGCGAT CGGCATCGCG
GTGAGCGCGA CGATGCTCAA CGACCGGCTG AACTTTCACT ACCTGCGGCT GAACGAGCAC
GTGAGCGCCG GCGAGCCGCA GGTCGCGTCG CTGCTCGATC GCCAGGCCGC GTACTGGACC
TCGGTGGCCG GCAACACGCT CGATACCGCC CAGGCCGGCC TCGCGAACCT GCATCGCCTG
ATCTATCGCG AAGCGCTGAC GCTCACCTAC GCGGATGCGT ACTACGCGCT GTCGCTGTGC
TTCATCGTCG CGCTGATCGC CGTCGCGTTT TCCCGTCCCA TTACCCTGAA CGCGCCGCCG
CCGGACGCGC ACTGA
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| Protein sequence | MTTAFSGDPA SQPTKQRVFA FALMCVGFFM ATLDIQIVAS SLRDIGGGLS ASQDELSWVQ
TAYLIAEIIV IPMSGWLSKV MSTRWLFVAS AVGFTITSML CGLAWDINSM ILFRGLQGAL
GAAMIPTVFT TAFVLFPGRQ RLIASTTIGA LASLAPAIGP VIGGWITDQW SWHWLFYLNL
VPGIAVAVLV PRYVHIDEPD PSLLKRGDYL GIALMSGFLG CLEYVLEEGP RKNWFSDDAI
VICAWISAIC GFLFIVHALT ADDPVVDLRA LAVRNFGIGS LLSFVTGIGI FVTVFLTPLF
LSQVRAFSSL QIGIALLSVG AFQLVALCAY AFAARYFSMR ALLVFGLVCF GLGCYLYTPI
THDWGWRELL LPQALRGIGQ QFSVPPIVTM ALGSLPQSRL KSASGLFNLM RNLGGAIGIA
VSATMLNDRL NFHYLRLNEH VSAGEPQVAS LLDRQAAYWT SVAGNTLDTA QAGLANLHRL
IYREALTLTY ADAYYALSLC FIVALIAVAF SRPITLNAPP PDAH
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