| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3617 |
|---|
| Symbol | |
|---|
| ID | 6179535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 556752 |
|---|
| End bp | 557438 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641683387 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001810300 |
|---|
| Protein GI | 172062649 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.238971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCTC GAACTGACGG GATGCGTGCG GCTTCTTCCG CCGCCGCCCG CGACGACGAT
GAAGCGGAAG GCGCGCAGTC CGGACGCTGG CTGATTTCCT ACGCGGATCT CATCACGACG
CTGATGGTGC TGTTTCTCGC GCTGTACGTG CTGCAGCTCG CGAAATACAA CGCGCTCGAT
GCGCGATATC AGACGCTCGC GCGGCACGAC GGCGGCGCGG CAAGCGTGAC TGCGGCCGCA
CCTGCGACAC CCGAGCGCGC GCCCGCATGG CTGACGTCGC TCGATGCGCT GAAGACGAAC
GGCCGCATCT CGCTCGTGCG GGCGCCGCAC GGCATCGAGA TCGGCATCGA TGCGAAGATC
CTGTTCAACG TCGGCGATGC GCGCCTGCTG CCCGACGCGA CGCCGGTGCT GAGCGAGATC
GCGCGGGCGC TGAGCGAGCA TGCGACCGGC GACATACTCG TCGAGGGGCA TACCGACAGC
GCGCCGATCG CGAACGCGAA ATACGAATCG AACTGGGAGC TGTCATCCGC GCGGGCGGGC
AGCGTCGTGC GCTATCTGGC CGATCGCGGC GTCGCGCCCC ACCGGCTCGC GGCGATCGGG
CGAGCCGACA CGCAGCCGCT CGTCGCCAGC GACGATGCGC CCGCGCGGGC GCGCAACCGC
CGCGTGACGA TCTTCGTGGC ATATTGA
|
|---|
| Protein sequence | MTARTDGMRA ASSAAARDDD EAEGAQSGRW LISYADLITT LMVLFLALYV LQLAKYNALD
ARYQTLARHD GGAASVTAAA PATPERAPAW LTSLDALKTN GRISLVRAPH GIEIGIDAKI
LFNVGDARLL PDATPVLSEI ARALSEHATG DILVEGHTDS APIANAKYES NWELSSARAG
SVVRYLADRG VAPHRLAAIG RADTQPLVAS DDAPARARNR RVTIFVAY
|
|---|
| |